Tableau information
Concept source: d2vjqa_ amino acid (a.a.) range (ASP91)(VAL124)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP91) (ASN96) E1
(GLY100) (MET105) H2
(THR108) (LEU115) H3
(ARG118) (VAL124) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 118.6° H2
H3 156.9° 57.7° H3
E4 -15.6° 129.8° 147.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1e1cb2 : (GLN563) (GLY597) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methylmalonyl-CoA mutase beta subunit, C-terminal domain |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d2ozga2 : (ASP256) (LEU287) [view usage] : d.108.1.10 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |EF1021-like |Putative acetyltransferase Ava4977 |Anabaena variabilis [TaxId: 1172]
d3g1ka_ : (ALA2) (GLU38) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d1mxaa2 : (ASP181) (ASN225) [view usage] : d.130.1.1 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |Escherichia coli [TaxId: 562]
d1dewb_ : (THR61) (GLU96) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
d2os5a_ : (MET2) (ALA43) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Ancylostoma ceylanicum [TaxId: 53326]
d1a6db2 : (LYS236) (GLN292) [view usage] : c.8.5.2 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |Group II chaperonin (CCT, TRIC), apical domain |Thermosome, A-domain |Thermoplasma acidophilum, beta chain [TaxId: 2303]
d3t5pb_ : (THR89) (PRO125) [view usage] : e.52.1.0 |NAD kinase/diacylglycerol kinase-like |NAD kinase/diacylglycerol kinase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 260799]
d1uawa_ : (LYS21) (ARG53) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Musashi-1 |Mouse (Mus musculus) [TaxId: 10090]
d2isia_ : (THR61) (GLU96) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3bdia_ : (ARG27) (ASP62) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thermoplasma acidophilum [TaxId: 273075]
d2y7rc_ : (ARG97) (ARG132) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
d4guma_ : (LEU58) (ALA104) [view usage] : d.80.1.3 |Tautomerase/MIF |Tautomerase/MIF |MIF-related |Microphage migration inhibition factor (MIF) |Rhesus monkey (Macaca mulatta) [TaxId: 9544]
d4lkba_ : (GLN3) (LEU46) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Nostoc sp. [TaxId: 103690]
d1bixa_ : (THR61) (GLU96) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
d2rslc_ : (GLY58) (PHE92) [view usage] : c.53.1.1 |Resolvase-like |Resolvase-like |gamma,delta resolvase, catalytic domain |gamma,delta resolvase, catalytic domain |Escherichia coli [TaxId: 562]
d2gdva2 : (LYS4) (PRO41) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Sucrose phosphorylase |Bifidobacterium adolescentis [TaxId: 1680]
d3g2da_ : (LEU4) (GLU38) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d3g2db_ : (LEU4) (GLU38) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d3lqca_ : (ARG7) (GLU50) [view usage] : b.18.1.8 |Galactose-binding domain-like |Galactose-binding domain-like |N-terminal domain of xrcc1 |N-terminal domain of xrcc1 |Human (Homo sapiens) [TaxId: 9606]
d3fzia_ : (LEU4) (GLU38) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d4hl6d_ : (ASP95) (SER129) [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1dewa_ : (THR61) (GLU96) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
d2v70a_ : (LYS609) (LEU637) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2q16a_ : (MSE1) (ALA30) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3w2xa_ : (LEU4) (GLU38) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d1ztvb_ : (PRO31) (VAL65) [view usage] : c.1.32.1 |TIM beta/alpha-barrel |TM1631-like |TM1631-like |automated matches |Enterococcus faecalis [TaxId: 226185]
d2rslb_ : (GLY58) (PHE92) [view usage] : c.53.1.1 |Resolvase-like |Resolvase-like |gamma,delta resolvase, catalytic domain |gamma,delta resolvase, catalytic domain |Escherichia coli [TaxId: 562]
d1pota_ : (ASN27) (GLU60) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Spermidine/putrescine-binding protein PotD |Escherichia coli [TaxId: 562]
d3w2ya_ : (THR2) (GLU38) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d1px8a2 : (TYR20) (HIS54) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-D-xylosidase, catalytic domain |Thermoanaerobacterium saccharolyticum [TaxId: 28896]
d1uthb_ : (ARG97) (ARG132) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |LysR-type regulatory protein DntR |Burkholderia sp. [TaxId: 36773]
d2jc5a_ : (LEU2) (GLU36) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 487]
d1de8a_ : (THR61) (GLU96) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
d3g00b_ : (LEU4) (GLU38) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d2bisa1 : (ILE189) (ASP220) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Pyrococcus abyssi [TaxId: 29292]
d4qh9a_ : (THR61) (GLU96) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.123, c.69, c.94, d.58, c.23, d.151, b.18, c.87, d.108, c.53, c.8, c.51, d.130, e.52, d.80