Tableau information
Concept source: d3bpba_ amino acid (a.a.) range (LYS3)(PRO53)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS3) (ARG8) E1
(ALA11) (ASP16) H2
(ASP27) (GLN43) H3
(VAL47) (PRO53) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 68.4° H2
H3 -170.1° 120.8° H3
E4 -16.5° 77.8° -155.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2q01b_ : (THR246) (PRO308) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Caulobacter vibrioides [TaxId: 190650]
d3hb7f_ : (LYS3) (ARG59) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Alkaliphilus metalliredigens [TaxId: 293826]
d1xq6a_ : (LYS126) (ALA174) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Hypothetical protein At5g02240 (T7H20_290) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1gvnd_ : (GLU138) (ASN205) [view usage] : c.37.1.21 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Plasmid maintenance system epsilon/zeta, toxin zeta subunit |Plasmid maintenance system epsilon/zeta, toxin zeta subunit |Streptococcus pyogenes [TaxId: 1314]
d1j2rc_ : (ALA21) (GLY68) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Hypothetical protein YecD |Escherichia coli [TaxId: 562]
d3iacc_ : (ARG236) (ILE300) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d3d8ha_ : (ARG107) (PRO141) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Cryptosporidium parvum [TaxId: 353152]
d1n57a_ : (GLY203) (ASN244) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d2fb2b_ : (ARG121) (VAL167) [view usage] : c.1.28.3 |TIM beta/alpha-barrel |Radical SAM enzymes |MoCo biosynthesis proteins |Molybdenum cofactor biosynthesis protein A MoaA |Staphylococcus aureus [TaxId: 1280]
d2q01a_ : (THR246) (PRO308) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Caulobacter vibrioides [TaxId: 190650]
d3iaca_ : (ARG236) (ILE300) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d2wtxd_ : (ARG2) (TRP41) [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4mqbb_ : (ASP126) (ASN182) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d1j5sb_ : (VAL228) (GLY292) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uronate isomerase TM0064 |Thermotoga maritima [TaxId: 2336]
d3kipi_ : (LYS2) (SER53) [view usage] : c.23.13.0 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |automated matches |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d1j2ra_ : (ALA21) (GLY68) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Hypothetical protein YecD |Escherichia coli [TaxId: 562]
d2jcsa_ : (ASP148) (ASP206) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1j2rb_ : (ALA21) (GLY68) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Hypothetical protein YecD |Escherichia coli [TaxId: 562]
d2ccga_ : (ASP126) (ASN182) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1j90a_ : (ASP148) (ASP206) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxyribonucleoside kinase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1h70a_ : (LYS3) (PRO53) [view usage] : d.126.1.3 |Pentein, beta/alpha-propeller |Pentein |Dimethylarginine dimethylaminohydrolase DDAH |Dimethylarginine dimethylaminohydrolase DDAH |Pseudomonas aeruginosa [TaxId: 287]
d1esca_ : (LYS180) (ASP244) [view usage] : c.23.10.1 |Flavodoxin-like |SGNH hydrolase |Esterase |Esterase |Streptomyces scabies [TaxId: 1930]
d2yckx_ : (LEU158) (GLY197) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |automated matches |Carboxydothermus hydrogenoformans [TaxId: 246194]
d1gtza_ : (ILE9) (SER56) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
d1j5sa_ : (VAL228) (GLY292) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uronate isomerase TM0064 |Thermotoga maritima [TaxId: 2336]
d1sioa_ : (SER123) (ALA161) [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Alicyclobacillus sendaiensis, kumamolisin-as [TaxId: 192387]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, c.23, c.37, c.87, c.60, d.126, c.41, c.33