Tableau information
Concept source: d2ogya_ amino acid (a.a.) range (MET1)(VAL46)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET1) (GLY5) E1
(PHE12) (ARG22) H2
(PRO26) (GLY38) H3
(ARG40) (VAL46) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 57.5° H2
H3 161.0° -135.1° H3
E4 -38.0° -66.9° 150.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2z51a1 : (ASN35) (GLU79) [view usage] : d.52.8.0 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |automated matches |automated matches |Arabidopsis thaliana
d2rd5a_ : (LYS36) (GLY77) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1fa2a_ : (ASN11) (TRP56) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Sweet potato (Ipomoea batatas) [TaxId: 4120]
d2ogya_ : (MET1) (VAL46) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |automated matches |Moorella thermoacetica [TaxId: 1525]
d4jjfa1 : (PHE70) (PHE117) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Methanothermobacter marburgensis [TaxId: 79929]
d4i5ra_ : (ASN258) (ASN303) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |automated matches |Fungus (Humicola insolens) [TaxId: 34413]
d2e7fa_ : (MET1) (VAL46) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |automated matches |Moorella thermoacetica [TaxId: 1525]
d1o0pa_ : (GLU376) (PRO420) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor U2AF 65 KDa subunit |Human (Homo sapiens) [TaxId: 9606]
d4fmpa_ : (PRO9) (VAL53) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1bfna_ : (ASN10) (TRP55) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Soybean (Glycine max) [TaxId: 3847]
d2xffa_ : (ASN8) (TRP54) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.2, c.6, d.58, c.73, d.52