Tableau information
Concept source: d4lnya_ amino acid (a.a.) range (ALA47)(GLU85)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA47) (LYS53) E1
(ILE67) (MSE73) H2
(MSE73) (ALA77) H3
(GLY79) (GLU85) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 174.0° H2
H3 -139.0° -41.7° H3
E4 -24.3° 155.9° 114.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4m9da_ : (SER2) (GLN34) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1nhoa_ : (VAL2) (ASP40) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |MTH807, thioredoxin/glutaredoxin-like protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d4m9db_ : (SER2) (GLN34) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1qgoa_ : (VAL77) (VAL111) [view usage] : c.92.1.2 |Chelatase-like |Chelatase |Cobalt chelatase CbiK |Cobalt chelatase CbiK |Salmonella typhimurium [TaxId: 90371]
d1tg7a5 : (ILE255) (GLU299) [view usage] : c.1.8.14 |TIM beta/alpha-barrel |(Trans)glycosidases |Glycosyl hydrolases family 35 catalytic domain |Beta-galactosidase LacA, N-terminal domain |Penicillium sp. [TaxId: 5081]
d1vhna_ : (ASN60) (ALA91) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Putative flavin oxidoreducatase TM0096 |Thermotoga maritima [TaxId: 2336]
d4a2sa_ : (ALA47) (GLU85) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d2nuwa_ : (LYS67) (HIS98) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Sulfolobus acidocaldarius [TaxId: 330779]
d3tc6a_ : (ALA47) (GLU85) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d3p9qa2 : (ARG601) (SER635) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2cv9a1 : (MSE1) (ASN35) [view usage] : d.159.1.10 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TTHA0625-like |Hypothetical protein TTHA0625 |Thermus thermophilus [TaxId: 274]
d4m76b_ : (ASP132) (GLU178) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wqka_ : (PRO2) (ALA34) [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d3eqzb_ : (ASN3) (GLN33) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Colwellia psychrerythraea [TaxId: 167879]
d3gbva_ : (TYR66) (TYR110) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d1un8a4 : (LEU254) (GLY290) [view usage] : c.119.1.2 |DAK1/DegV-like |DAK1/DegV-like |DAK1 |Dihydroxyacetone kinase |Citrobacter freundii [TaxId: 546]
d4qr0b_ : (MET1) (CYS41) [view usage] : d.58.58.0 |Ferredoxin-like |TTP0101/SSO1404-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301447]
d1a53a_ : (ALA47) (GLU85) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Indole-3-glycerophosphate synthase, IPGS |Sulfolobus solfataricus [TaxId: 2287]
d4a2ra_ : (ALA47) (GLU85) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d3o6yx_ : (ALA47) (GLU85) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |automated matches |Artificial gene [TaxId: 32630]
d3ty2a_ : (ARG13) (ALA44) [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d4lnya_ : (ALA47) (GLU85) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |automated matches |Artificial gene [TaxId: 32630]
d2v4na_ : (ARG2) (VAL32) [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d4oxxa_ : (ALA3) (ASP35) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Citrobacter braakii [TaxId: 57706]
d3tria1 : (ALA129) (SER162) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d1v7ra_ : (MET1) (GLN29) [view usage] : c.51.4.1 |Anticodon-binding domain-like |ITPase-like |ITPase (Ham1) |XTP pyrophosphatase |Pyrococcus horikoshii [TaxId: 53953]
d1jcmp_ : (THR48) (ASP89) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Indole-3-glycerophosphate synthase, IPGS |Escherichia coli [TaxId: 562]
d4dlla1 : (LEU162) (GLY190) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]
d1fnna2 : (ARG74) (ASP132) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |CDC6, N-domain |Pyrobaculum aerophilum [TaxId: 13773]
d1wdwb_ : (ASP220) (ALA252) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Pyrococcus furiosus [TaxId: 2261]
d2v4od_ : (ARG2) (VAL32) [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d1nara_ : (PRO3) (GLY38) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Seed storage protein |Vicia narbonensis, Narbonin [TaxId: 3912]
d1cf9a1 : (ARG601) (SER635) [view usage] : c.23.16.3 |Flavodoxin-like |Class I glutamine amidotransferase-like |Catalase, C-terminal domain |Catalase, C-terminal domain |Escherichia coli, HPII [TaxId: 562]
d2z06a_ : (MET1) (ASN35) [view usage] : d.159.1.10 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TTHA0625-like |Hypothetical protein TTHA0625 |Thermus thermophilus [TaxId: 274]
d1yqga2 : (LEU119) (ASP152) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Neisseria meningitidis, serogroup B [TaxId: 487]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, d.159, d.58, c.79, c.92, c.93, c.23, c.37, c.47, c.62, c.51, c.119, c.106