Tableau information
Concept source: d3g1fa_ amino acid (a.a.) range (ASP39)(PHE71)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP39) (TYR45) E1
(TYR45) (GLU51) H2
(ILE55) (GLY64) H3
(ARG66) (PHE71) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -68.5° H2
H3 168.3° 109.2° H3
E4 -19.0° -87.5° 159.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2wxba_ : (PRO4) (GLY43) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |automated matches |Escherichia coli [TaxId: 469008]
d2gg6a_ : (LYS312) (GLY346) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d2f48a_ : (ASN269) (PRO311) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |automated matches |Borrelia burgdorferi [TaxId: 224326]
d1u7pc_ : (LYS6) (ARG70) [view usage] : c.108.1.17 |HAD-like |HAD-like |Magnesium-dependent phosphatase-1, Mdp1 |Magnesium-dependent phosphatase-1, Mdp1 |Mouse (Mus musculus) [TaxId: 10090]
d4pmxa_ : (ALA217) (GLU254) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d3q83a_ : (MET1) (LEU37) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Staphylococcus aureus [TaxId: 93062]
d1itqa_ : (LEU121) (THR151) [view usage] : c.1.9.7 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Renal dipeptidase |Renal dipeptidase |Human (Homo sapiens) [TaxId: 9606]
d1g8ka2 : (ARG378) (HIS423) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d2f48b_ : (ASN269) (PRO311) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |automated matches |Borrelia burgdorferi [TaxId: 224326]
d1b7ba_ : (LYS4) (GLY52) [view usage] : c.73.1.1 |Carbamate kinase-like |Carbamate kinase-like |Carbamate kinase |Carbamate kinase |Enterococcus faecium [TaxId: 1352]
d1af7a2 : (ASP225) (GLY261) [view usage] : c.66.1.8 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Chemotaxis receptor methyltransferase CheR, C-terminal domain |Chemotaxis receptor methyltransferase CheR, C-terminal domain |Salmonella typhimurium [TaxId: 90371]
d1o4wa_ : (LYS10) (THR46) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein AF0591 |Archaeoglobus fulgidus [TaxId: 2234]
d1ijja2 : (ALA295) (PRO332) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d4di6c_ : (LEU4) (LEU42) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d1u7pa_ : (LYS6) (ARG70) [view usage] : c.108.1.17 |HAD-like |HAD-like |Magnesium-dependent phosphatase-1, Mdp1 |Magnesium-dependent phosphatase-1, Mdp1 |Mouse (Mus musculus) [TaxId: 10090]
d1g8ja2 : (ARG378) (HIS423) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d1u7pd_ : (LYS6) (ARG70) [view usage] : c.108.1.17 |HAD-like |HAD-like |Magnesium-dependent phosphatase-1, Mdp1 |Magnesium-dependent phosphatase-1, Mdp1 |Mouse (Mus musculus) [TaxId: 10090]
d4a2ba2 : (GLY331) (THR358) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Cell division protein FtsA |Thermotoga maritima [TaxId: 2336]
d1acoa2 : (GLY235) (PRO271) [view usage] : c.83.1.1 |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase A, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d4mhba_ : (LEU83) (ILE120) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Yersinia pestis [TaxId: 632]
d2a6qd_ : (ARG11) (GLN41) [view usage] : d.306.1.1 |YefM-like |YefM-like |YefM-like |Antitoxin YefM |Escherichia coli [TaxId: 562]
d1ncla_ : (GLU9) (GLN44) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1b0ja2 : (ILE237) (PRO271) [view usage] : c.83.1.1 |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase A, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2df4a1 : (LEU259) (ASN301) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Glutamyl-tRNA(Gln) amidotransferase subunit A |Staphylococcus aureus [TaxId: 1280]
d4rjza_ : (LYS139) (ILE187) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d1dida_ : (ILE210) (ASN246) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Arthrobacter, strain b3728 [TaxId: 1663]
d7xima_ : (LEU211) (ASN247) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Actinoplanes missouriensis [TaxId: 1866]
d2hmfa1 : (THR2) (ALA41) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Methanococcus jannaschii [TaxId: 2190]
d1dcea3 : (VAL536) (THR567) [view usage] : c.10.2.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1kzha_ : (ASN269) (PRO311) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |Pyrophosphate-dependent phosphofructokinase |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d4lrtc1 : (PRO11) (HIS55) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Thermomonospora curvata [TaxId: 471852]
d3c1nb1 : (THR2) (ALA41) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d3b92a_ : (ASN223) (LYS286) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d3t7bb_ : (LEU4) (GLY42) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |automated matches |Yersinia pestis [TaxId: 214092]
d2flil_ : (THR3) (ASP39) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d3ewjb_ : (ASN223) (SER287) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d3f4nc_ : (LEU5) (ARG47) [view usage] : c.1.24.1 |TIM beta/alpha-barrel |Pyridoxine 5'-phosphate synthase |Pyridoxine 5'-phosphate synthase |automated matches |Yersinia pestis [TaxId: 632]
d1aj0a_ : (HIS14) (GLY59) [view usage] : c.1.21.1 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Dihydropteroate synthetase |Dihydropteroate synthetase |Escherichia coli [TaxId: 562]
d1xlma_ : (ILE210) (ASN246) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Arthrobacter, strain b3728 [TaxId: 1663]
d2j0xb1 : (ILE4) (ALA40) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Escherichia coli [TaxId: 562]
d2oi0a_ : (ASN223) (SER287) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4xiaa_ : (ILE210) (ASN246) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Arthrobacter, strain b3728 [TaxId: 1663]
d1jyka_ : (SER163) (GLU208) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CTP:phosphocholine cytidylytransferase LicC |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1a76a2 : (LYS22) (ASP80) [view usage] : c.120.1.2 |PIN domain-like |PIN domain-like |5' to 3' exonuclease catalytic domain |Flap endonuclease-1 (Fen-1 nuclease) |Methanococcus jannaschii [TaxId: 2190]
d1fuoa_ : (ALA223) (THR260) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Fumarase |Escherichia coli [TaxId: 562]
d1mc8a2 : (LYS22) (ASP80) [view usage] : c.120.1.2 |PIN domain-like |PIN domain-like |5' to 3' exonuclease catalytic domain |Flap endonuclease-1 (Fen-1 nuclease) |Pyrococcus horikoshii [TaxId: 53953]
d1wyub_ : (VAL234) (LEU264) [view usage] : c.67.1.7 |PLP-dependent transferase-like |PLP-dependent transferases |Glycine dehydrogenase subunits (GDC-P) |Glycine dehydrogenase subunit 2 (P-protein) |Thermus thermophilus [TaxId: 274]
d2we4a_ : (LYS4) (GLY52) [view usage] : c.73.1.1 |Carbamate kinase-like |Carbamate kinase-like |Carbamate kinase |Carbamate kinase |Enterococcus faecalis [TaxId: 1351]
d1yj5a1 : (LEU212) (HIS253) [view usage] : c.108.1.9 |HAD-like |HAD-like |phosphatase domain of polynucleotide kinase |5' polynucleotide kinase-3' phosphatase, middle domain |Mouse (Mus musculus) [TaxId: 10090]
d3h5qa2 : (ASP194) (GLN241) [view usage] : c.27.1.0 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d2cdqa1 : (CYS29) (ALA65) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4bp0c_ : (LYS210) (GLY257) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2ggda_ : (LYS312) (GLY346) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d2ddfb_ : (ASN223) (SER287) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d3r77a_ : (PRO72) (TRP123) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Phenazine biosynthesis protein PhzD |Pseudomonas fluorescens [TaxId: 294]
d2hvea_ : (GLU5) (PHE40) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Human (Homo sapiens), NDKA [TaxId: 9606]
d1b43a2 : (ILE23) (ASP79) [view usage] : c.120.1.2 |PIN domain-like |PIN domain-like |5' to 3' exonuclease catalytic domain |Flap endonuclease-1 (Fen-1 nuclease) |Pyrococcus furiosus [TaxId: 2261]
d1u7pb_ : (LYS6) (ARG70) [view usage] : c.108.1.17 |HAD-like |HAD-like |Magnesium-dependent phosphatase-1, Mdp1 |Magnesium-dependent phosphatase-1, Mdp1 |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.67, c.81, c.94, d.68, d.58, c.68, c.108, c.117, d.157, c.66, d.92, a.127, c.55, c.89, c.73, c.33, c.120, c.27,
c.83, d.306