Tableau information
Concept source: d4m8ua1 amino acid (a.a.) range (TRP323)(TYR368)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TRP323) (GLU329) E1
(ASN342) (ARG347) H2
(ARG347) (LEU358) H3
(THR364) (TYR368) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -89.9° H2
H3 168.0° 101.3° H3
E4 -18.2° -96.8° 152.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4f1ra_ : (MET1) (ASP35) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1tuxa_ : (ARG124) (ASN175) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d3aiaa_ : (MET1) (VAL55) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d2i5ea1 : (MSE1) (SER52) [view usage] : c.68.1.21 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |MM2497-like |Hypothetical protein MM2497 |Methanosarcina mazei [TaxId: 2209]
d2vfwa_ : (ARG33) (TYR83) [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2vg1a_ : (ARG33) (TYR83) [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3qasa_ : (ARG19) (TYR68) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2cffa_ : (ASP119) (GLU165) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA |Thermotoga maritima [TaxId: 2336]
d2a0kb_ : (HIS5) (PRO46) [view usage] : c.23.14.1 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |N-deoxyribosyltransferase |Nucleoside 2-deoxyribosyltransferase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d3uvia_ : (PRO40) (ASN70) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d1qo2a_ : (ASP119) (GLU165) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA |Thermotoga maritima [TaxId: 2336]
d2v81a_ : (PRO8) (PRO39) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2b69a1 : (ASP70) (THR118) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |UDP-glucuronate decarboxylase 1 |Human (Homo sapiens) [TaxId: 9606]
d2pb9a1 : (PHE381) (LEU424) [view usage] : c.74.1.2 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |Phosphomethylpyrimidine kinase C-terminal domain-like |Phosphomethylpyrimidine kinase |Pyrococcus furiosus [TaxId: 2261]
d2i5eb_ : (ALA0) (PRO53) [view usage] : c.68.1.21 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |MM2497-like |Hypothetical protein MM2497 |Methanosarcina mazei [TaxId: 2209]
d1ui1a_ : (LYS35) (VAL82) [view usage] : c.18.1.2 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Mug-like |Thermophilic uracil-DNA glycosylase |Thermus thermophilus [TaxId: 274]
d1ui0a_ : (LYS35) (VAL82) [view usage] : c.18.1.2 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Mug-like |Thermophilic uracil-DNA glycosylase |Thermus thermophilus [TaxId: 274]
d3qtpa2 : (GLU239) (ASP297) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d3ai9x_ : (HIS1) (VAL55) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d1vk2a_ : (ARG40) (VAL87) [view usage] : c.18.1.2 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Mug-like |Thermophilic uracil-DNA glycosylase |Thermotoga maritima [TaxId: 2336]
d2ibsa1 : (ASP100) (PHE162) [view usage] : c.66.1.27 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |DNA methylase TaqI, N-terminal domain |DNA methylase TaqI, N-terminal domain |Thermus aquaticus [TaxId: 271]
d3ttla_ : (SER28) (ASP60) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2z1aa2 : (PRO76) (ASN115) [view usage] : d.159.1.2 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |Thermus thermophilus [TaxId: 274]
d2ycix_ : (LEU158) (GLY197) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |automated matches |Carboxydothermus hydrogenoformans [TaxId: 246194]
d1xwya1 : (MET1) (THR37) [view usage] : c.1.9.12 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |TatD Mg-dependent DNase-like |Deoxyribonuclease TatD (MttC) |Escherichia coli [TaxId: 562]
d2x0sa1 : (GLY583) (ARG642) [view usage] : c.1.12.2 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Pyruvate phosphate dikinase, C-terminal domain |Pyruvate phosphate dikinase, C-terminal domain |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d2x2ya1 : (ALA65) (ALA112) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Cellulomonas fimi [TaxId: 1708]
d1l9ga_ : (ARG40) (VAL87) [view usage] : c.18.1.2 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Mug-like |Thermophilic uracil-DNA glycosylase |Thermotoga maritima [TaxId: 2336]
d2bvta2 : (ALA65) (ALA112) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Mannanase A, ManA |Cellulomonas fimi [TaxId: 1708]
d3ppha1 : (MET1) (ASN61) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d3paja2 : (ALA253) (ALA280) [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d1p1ma2 : (ALA50) (MET114) [view usage] : c.1.9.9 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |SAH/MTA deaminase-like |Hypothetical protein TM0936, probable catalytic domain |Thermotoga maritima [TaxId: 2336]
d1ghha_ : (MET1) (ARG43) [view usage] : d.57.1.1 |DNA damage-inducible protein DinI |DNA damage-inducible protein DinI |DNA damage-inducible protein DinI |DNA damage-inducible protein DinI |Escherichia coli [TaxId: 562]
d4m8ua1 : (TRP323) (TYR368) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus subtilis [TaxId: 224308]
d4lnca_ : (PRO87) (GLY138) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1x07a_ : (ARG19) (TYR68) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
d4h8ea_ : (GLU26) (TYR75) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Staphylococcus aureus [TaxId: 158879]
d1u1ha1 : (ALA2) (ASN60) [view usage] : c.1.22.2 |TIM beta/alpha-barrel |UROD/MetE-like |Cobalamin-independent methionine synthase |5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1v7ua_ : (ARG19) (TYR68) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Escherichia coli [TaxId: 562]
d4glla_ : (ASP154) (THR202) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, c.2, d.159, c.68, c.66, c.74, c.23, c.18, d.151, c.101, c.116, d.57