Tableau information
Concept source: d2wtra1 amino acid (a.a.) range (LEU79)(ILE119)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU79) (GLN85) E1
(ALA90) (PRO96) H2
(THR98) (LEU108) H3
(TYR113) (ILE119) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -113.3° H2
H3 -44.4° -124.1° H3
E4 158.4° 63.4° 156.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ayxa_ : (ASP386) (LYS420) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |Glucoamylase |Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]
d1vgld_ : (ASP57) (TYR94) [view usage] : c.47.1.15 |Thioredoxin fold |Thioredoxin-like |KaiB-like |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1j6ya_ : (GLY80) (THR119) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Mitotic rotamase PIN1, domain 2 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1xb2b2 : (TYR172) (ALA222) [view usage] : d.43.1.1 |EF-Ts domain-like |Elongation factor Ts (EF-Ts), dimerisation domain |Elongation factor Ts (EF-Ts), dimerisation domain |Elongation factor Ts (EF-Ts), dimerisation domain |Cow (Bos taurus), mitochondrial [TaxId: 9913]
d4n8x1_ : (VAL56) (ALA81) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Carbon dioxide concentrating mechanism protein CcmL |Nostoc sp. [TaxId: 103690]
d4jw0a_ : (LEU56) (GLY80) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |automated matches |Gloeobacter violaceus [TaxId: 251221]
d1umbc_ : (ASP89) (SER134) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |Branched-chain alpha-keto acid dehydrogenase, PP module |Thermus thermophilus [TaxId: 274]
d4n8x2_ : (VAL56) (ALA81) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Carbon dioxide concentrating mechanism protein CcmL |Nostoc sp. [TaxId: 103690]
d4n8xe_ : (VAL56) (ALA81) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Carbon dioxide concentrating mechanism protein CcmL |Nostoc sp. [TaxId: 103690]
d2ewba1 : (LYS197) (LYS235) [view usage] : c.56.5.3 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Leucine aminopeptidase, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d2qw7h_ : (VAL55) (VAL78) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Carbon dioxide concentrating mechanism protein CcmL |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1u0sa_ : (GLY175) (PHE232) [view usage] : d.58.24.1 |Ferredoxin-like |CheY-binding domain of CheA |CheY-binding domain of CheA |CheY-binding domain of CheA |Thermotoga maritima [TaxId: 2336]
d1h2ha3 : (GLY143) (PRO186) [view usage] : d.81.1.3 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |Dihydrodipicolinate reductase-like |Hypothetical protein TM1643 |Thermotoga maritima [TaxId: 2336]
d1j5pa3 : (GLY143) (ALA184) [view usage] : d.81.1.3 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |Dihydrodipicolinate reductase-like |Hypothetical protein TM1643 |Thermotoga maritima [TaxId: 2336]
d1kzma_ : (PHE172) (ASP222) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
d4a5gb_ : (PHE173) (ASN221) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Radish (Raphanus sativus) [TaxId: 3726]
d4jvzd_ : (VAL55) (ALA80) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Carbon dioxide concentrating mechanism protein CcmL |Thermosynechococcus elongatus [TaxId: 197221]
d4n8fa_ : (LEU56) (ALA80) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Carbon dioxide concentrating mechanism protein CcmL |Thermosynechococcus elongatus [TaxId: 197221]
d1bp1a2 : (LEU276) (SER319) [view usage] : d.83.1.1 |Aha1/BPI domain-like |Bactericidal permeability-increasing protein, BPI |Bactericidal permeability-increasing protein, BPI |Bactericidal permeability-increasing protein, BPI |Human (Homo sapiens) [TaxId: 9606]
d1atja_ : (PHE172) (ASP222) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
d2qw7a1 : (VAL55) (GLY80) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Carbon dioxide concentrating mechanism protein CcmL |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1blle2 : (LYS197) (LYS235) [view usage] : c.56.5.3 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Leucine aminopeptidase, C-terminal domain |Leucine aminopeptidase, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d4jw0b_ : (VAL55) (GLY80) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |automated matches |Gloeobacter violaceus [TaxId: 251221]
d1j6qa_ : (SER32) (GLY64) [view usage] : b.40.9.1 |OB-fold |Heme chaperone CcmE |Heme chaperone CcmE |Heme chaperone CcmE |Shewanella putrefaciens [TaxId: 24]
d1vglc_ : (GLU56) (GLU95) [view usage] : c.47.1.15 |Thioredoxin fold |Thioredoxin-like |KaiB-like |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1umba_ : (ASP89) (SER134) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |Branched-chain alpha-keto acid dehydrogenase, PP module |Thermus thermophilus [TaxId: 274]
d1cfza_ : (THR73) (GLY118) [view usage] : c.56.1.1 |Phosphorylase/hydrolase-like |HybD-like |Hydrogenase maturating endopeptidase HybD |Hydrogenase maturating endopeptidase HybD |Escherichia coli [TaxId: 562]
d1wwja_ : (ASP57) (TYR94) [view usage] : c.47.1.15 |Thioredoxin fold |Thioredoxin-like |KaiB-like |automated matches |Synechocystis sp. [TaxId: 1143]
d2j9aa1 : (LYS197) (LYS235) [view usage] : c.56.5.3 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Leucine aminopeptidase, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1gw2a_ : (PHE172) (ASP222) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
d1aqha2 : (ASN88) (ASP146) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d2kmla_ : (THR73) (GLY118) [view usage] : c.56.1.1 |Phosphorylase/hydrolase-like |HybD-like |Hydrogenase maturating endopeptidase HybD |Hydrogenase maturating endopeptidase HybD |Escherichia coli [TaxId: 562]
d3brqb_ : (SER248) (ASP287) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2wtra1 : (LEU79) (ILE119) [view usage] : b.1.18.11 |Immunoglobulin-like beta-sandwich |E set domains |Arrestin/Vps26-like |Arrestin |Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]
d7atja_ : (PHE172) (ASP222) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
d4n8x4_ : (VAL56) (ALA81) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Carbon dioxide concentrating mechanism protein CcmL |Nostoc sp. [TaxId: 103690]
d1wwjb_ : (GLU1056) (TYR1094) [view usage] : c.47.1.15 |Thioredoxin fold |Thioredoxin-like |KaiB-like |automated matches |Synechocystis sp. [TaxId: 1143]
d4qoaa_ : (ASP22) (LYS61) [view usage] : d.98.2.0 |BLIP-like |BT0923-like |automated matches |automated matches |Bacteroides uniformis [TaxId: 411479]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.58, c.56, a.102, c.93, a.93, b.40, c.36, c.47, d.81, b.1, d.98, d.26, d.83, d.43