Tableau information
Concept source: d1sgja_ amino acid (a.a.) range (ARG9)(VAL41)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG9) (PRO15) E1
(ARG18) (ALA29) H2
(ASP31) (ASP36) E3
(ASP36) (VAL41) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 162.5° H2
E3 -28.0° 165.8° E3
H4 -49.3° 124.0° -50.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1xova2 : (GLY87) (THR133) [view usage] : c.56.5.6 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |N-acetylmuramoyl-L-alanine amidase-like |Endolysin Ply, catalytic domain |Bacteriophage Psa [TaxId: 171618]
d1zbra1 : (GLY285) (LYS323) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Porphyromonas gingivalis [TaxId: 837]
d3b1ua3 : (GLN306) (MET343) [view usage] : d.126.1.5 |Pentein, beta/alpha-propeller |Pentein |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2ef9b_ : (PHE4) (ARG49) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Aquifex aeolicus [TaxId: 63363]
d1obja_ : (ARG223) (ILE272) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Malonamidase E2 |Bradyrhizobium japonicum [TaxId: 375]
d3tmqa_ : (ASN174) (LEU202) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d4rk0d_ : (LYS70) (ARG113) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d1eh5a_ : (LEU33) (GLU81) [view usage] : c.69.1.13 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Thioesterases |Palmitoyl protein thioesterase 1 |Cow (Bos taurus) [TaxId: 9913]
d1lpab2 : (LYS69) (THR112) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1uara1 : (THR81) (GLY122) [view usage] : c.46.1.2 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Multidomain sulfurtransferase (rhodanese) |Sulfurtransferase |Thermus thermophilus [TaxId: 274]
d1chma1 : (ARG119) (ARG156) [view usage] : c.55.2.1 |Ribonuclease H-like motif |Creatinase/prolidase N-terminal domain |Creatinase/prolidase N-terminal domain |Creatinase |Pseudomonas putida [TaxId: 303]
d1wdaa3 : (GLN306) (MET343) [view usage] : d.126.1.5 |Pentein, beta/alpha-propeller |Pentein |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3groa_ : (PRO30) (PHE85) [view usage] : c.69.1.13 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Thioesterases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hvma_ : (ASP280) (LYS317) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Helicobacter pylori J99 [TaxId: 85963]
d2cmua1 : (ASP282) (LYS319) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Helicobacter pylori J99 [TaxId: 85963]
d3uk2a_ : (ALA21) (GLY59) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1gpla2 : (LYS69) (ALA112) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Guinea pig (Cavia porcellus) [TaxId: 10141]
d2hbja2 : (ILE286) (GLY322) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exosome complex exonuclease RRP6 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2nx3a_ : (PHE4) (ARG49) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d2rfga_ : (ASP97) (VAL139) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Hahella chejuensis [TaxId: 158327]
d2vwsa_ : (ILE20) (PRO51) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3r8wa_ : (LYS3) (LEU52) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4dbda_ : (ARG5) (LEU39) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 555311]
d3grob_ : (LEU33) (PHE85) [view usage] : c.69.1.13 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Thioesterases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2c2vt_ : (GLU243) (GLU297) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2e18a_ : (LEU52) (GLU95) [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1kp0a1 : (LYS118) (VAL156) [view usage] : c.55.2.1 |Ribonuclease H-like motif |Creatinase/prolidase N-terminal domain |Creatinase/prolidase N-terminal domain |Creatinase |Actinobacillus sp. [TaxId: 41114]
d2nwsb_ : (PHE2004) (ARG2049) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d1skra1 : (GLY53) (ILE98) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of T7 DNA polymerase |Bacteriophage T7 [TaxId: 10760]
d1fwta_ : (PHE1004) (ARG1049) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d4rn7a_ : (GLY207) (SER253) [view usage] : c.56.5.0 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |automated matches |automated matches |Peptoclostridium difficile [TaxId: 272563]
d3b9nb_ : (LEU99) (GLY147) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Geobacillus thermodenitrificans [TaxId: 33940]
d3cepa_ : (PHE19) (ALA74) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Salmonella typhimurium [TaxId: 90371]
d4klra_ : (GLU183) (ASP246) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |Ferrochelatase |Human (Homo sapiens) [TaxId: 9606]
d1pv9b1 : (GLU86) (LEU121) [view usage] : c.55.2.1 |Ribonuclease H-like motif |Creatinase/prolidase N-terminal domain |Creatinase/prolidase N-terminal domain |Aminopeptidase P |Pyrococcus furiosus [TaxId: 2261]
d3h5oa_ : (THR297) (GLY341) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1fxqb_ : (PHE2004) (ARG2049) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d1obka_ : (ARG223) (ILE272) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Malonamidase E2 |Bradyrhizobium japonicum [TaxId: 375]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.26, c.56, c.92, c.117, c.77, c.93, c.55, d.126, c.46, g.44