Tableau information
Concept source: d4kcdb_ amino acid (a.a.) range (LYS65)(GLY115)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS65) (GLY70) E1
(GLY70) (ASP82) H2
(ASN84) (ASP94) E3
(GLY107) (GLY115) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -89.9° H2
E3 104.3° 149.2° E3
H4 -110.2° -23.1° 128.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3eulc_ : (ALA90) (ALA126) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3ktoa_ : (SER93) (LYS133) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
d3rf1a_ : (TYR52) (GLY100) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |automated matches |Campylobacter jejuni [TaxId: 354242]
d2r25b_ : (ALA1174) (GLU1208) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3a9ra2 : (TYR483) (TRP528) [view usage] : b.43.2.0 |Reductase/isomerase/elongation factor common domain |FucI/AraA C-terminal domain-like |automated matches |automated matches |Geobacillus pallidus [TaxId: 33936]
d3h07a_ : (HIS136) (ASP196) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |automated matches |Yersinia pestis [TaxId: 214092]
d3enzb_ : (ALA179) (GLU247) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Plasmodium falciparum [TaxId: 36329]
d1pvwa_ : (HIS147) (HIS206) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |Methanocaldococcus jannaschii [TaxId: 2190]
d1fuia1 : (TRP479) (TRP524) [view usage] : b.43.2.1 |Reductase/isomerase/elongation factor common domain |FucI/AraA C-terminal domain-like |L-fucose isomerase, C-terminal domain |L-fucose isomerase, C-terminal domain |Escherichia coli [TaxId: 562]
d4f1wa_ : (VAL169) (ALA230) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Salmonella enterica [TaxId: 904139]
d4fl0a_ : (LEU368) (HIS400) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4kfqb_ : (HIS57) (GLY116) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |N-methyl-D-aspartate receptor subunit 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1neka3 : (MET238) (ALA277) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydogenase |Escherichia coli [TaxId: 562]
d4f3ca_ : (VAL169) (ALA230) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Salmonella enterica [TaxId: 904139]
d3r9ya_ : (GLN114) (GLN150) [view usage] : d.18.1.0 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d1pvyb_ : (SER147) (HIS206) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |Methanocaldococcus jannaschii [TaxId: 2190]
d2wfba_ : (GLY74) (GLY110) [view usage] : c.55.5.0 |Ribonuclease H-like motif |Nitrogenase accessory factor-like |automated matches |automated matches |Desulfovibrio gigas [TaxId: 879]
d4egfa_ : (GLY225) (GLY262) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3mb8a_ : (ASP183) (TYR250) [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.94, c.2, c.56, c.23, d.104, c.55, d.168, b.43, d.18, d.115