Tableau information
Concept source: d3l8ab_ amino acid (a.a.) range (LYS346)(ILE381)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS346) (ASN350) E1
(GLY356) (LYS360) H2
(TYR361) (ASN366) E3
(LYS371) (ILE381) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 144.2° H2
E3 97.9° 112.9° E3
H4 -101.8° -49.6° 160.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1cqpa_ : (ARG256) (ILE306) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d2evea1 : (TYR3) (MSE41) [view usage] : b.122.1.8 |PUA domain-like |PUA domain-like |Atu2648/PH1033-like |Hypothetical protein PSPTO5229 |Pseudomonas syringae [TaxId: 317]
d1t3ta3 : (MET1) (GLN60) [view usage] : d.284.1.2 |PurS-like |PurS-like |FGAM synthase PurL, PurS-like domain |FGAM synthase PurL, PurS-like domain |Salmonella typhimurium [TaxId: 90371]
d3eoai_ : (ILE255) (LYS305) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d3eznb_ : (ASP118) (ARG158) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d2doua_ : (GLY336) (LEU375) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3gp3a_ : (ASP118) (ARG158) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d2doub_ : (GLY336) (LEU375) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1lfab_ : (ILE255) (ILE306) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d4fl0b_ : (HIS400) (ARG442) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1xuob_ : (ILE255) (THR300) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d3b1cd_ : (LYS347) (CYS384) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus anginosus [TaxId: 1328]
d3euca_ : (LYS326) (GLN365) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Ralstonia eutropha [TaxId: 264198]
d4k8va1 : (GLU343) (ASN377) [view usage] : d.218.1.15 |Nucleotidyltransferase |Nucleotidyltransferase |cGAMP synthase, cGAS N-terminal domain |cGAMP synthase, cGAS N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1lfaa_ : (ILE255) (ILE306) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d4fl0a_ : (HIS400) (PHE438) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2gbsa1 : (TRP4) (MET40) [view usage] : b.122.1.8 |PUA domain-like |PUA domain-like |Atu2648/PH1033-like |Hypothetical protein RPA0253 |Rhodopseudomonas palustris [TaxId: 1076]
d1ogya1 : (GLY687) (GLY731) [view usage] : b.52.2.2 |Double psi beta-barrel |ADC-like |Formate dehydrogenase/DMSO reductase, C-terminal domain |Periplasmic nitrate reductase alpha chain, NapA |Rhodobacter sphaeroides [TaxId: 1063]
d3b1cb_ : (LYS347) (CYS384) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus anginosus [TaxId: 1328]
d1gd9a_ : (ARG344) (LYS387) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aromatic aminoacid aminotransferase, AroAT |Pyrococcus horikoshii [TaxId: 53953]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.60, c.62, b.122, b.52, d.218, d.284