Protein Concepts Dictionary

Tableau information

Concept source:  d4mrib_  amino acid (a.a.) range (GLN12)(CYS61)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN12)   (GLY18) E1
	   (LEU25)   (ASN37) H2
	   (LEU46)   (ILE52) E3
	   (PRO55)   (CYS61) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
H2     -129.4°   H2                   
E3      -27.5° -126.3°   E3            
H4       29.2° -115.7°  -56.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mria_ :    (GLN12)   (CYS61)   [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2i3ca1 :    (GLN12)   (CYS61)   [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |Aspartoacylase AspA |Human (Homo sapiens) [TaxId: 9606]
 d2o53a_ :    (GLN12)   (CYS61)   [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |Aspartoacylase AspA |Human (Homo sapiens) [TaxId: 9606]
 d4tnua_ :    (GLN12)   (CYS61)   [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |Aspartoacylase AspA |Human (Homo sapiens) [TaxId: 9606]
 d4mrib_ :    (GLN12)   (CYS61)   [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wi8a_ :    (LYS37)   (ALA78)   [view usage] : c.92.2.4 |Chelatase-like |"Helical backbone" metal receptor |TM0189-like |automated matches |Bacillus subtilis [TaxId: 1423]
 d2phza1 :    (LYS37)   (ALA78)   [view usage] : c.92.2.4 |Chelatase-like |"Helical backbone" metal receptor |TM0189-like |Iron-uptake system-binding protein FeuA |Bacillus subtilis [TaxId: 1423]
 d2g39a2 :   (ILE352)  (ASP424)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Acetyl-CoA hydrolase (PA5445) |Pseudomonas aeruginosa [TaxId: 287]
 d2o4ha_ :    (GLN12)   (CYS61)   [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |Aspartoacylase AspA |Human (Homo sapiens) [TaxId: 9606]
 d2xuza_ :    (LYS37)   (ALA78)   [view usage] : c.92.2.4 |Chelatase-like |"Helical backbone" metal receptor |TM0189-like |automated matches |Bacillus subtilis [TaxId: 1423]
 d4mxua_ :    (GLN12)   (CYS61)   [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xv1a_ :    (LYS37)   (ALA78)   [view usage] : c.92.2.4 |Chelatase-like |"Helical backbone" metal receptor |TM0189-like |automated matches |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56,    c.92,   c.124