Tableau information
Concept source: d2bm8g_ amino acid (a.a.) range (PRO154)(TYR195)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO154) (ASN160) E1
(THR165) (LEU176) H2
(PHE183) (ASP187) E3
(ILE189) (TYR195) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 168.6° H2
E3 -28.1° 159.6° E3
H4 53.8° -128.2° 68.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3nh4a_ : (ARG13) (CYS61) [view usage] : c.56.5.0 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1vsqc_ : (SER262) (LYS323) [view usage] : c.38.1.0 |PTS IIb component |PTS IIb component |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1glva1 : (ASP81) (ASP121) [view usage] : c.30.1.3 |PreATP-grasp domain |PreATP-grasp domain |Prokaryotic glutathione synthetase, N-terminal domain |Prokaryotic glutathione synthetase, N-terminal domain |Escherichia coli [TaxId: 562]
d2w1va_ : (PHE42) (SER85) [view usage] : d.160.1.0 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1efva2 : (LYS216) (GLY255) [view usage] : c.31.1.2 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |C-terminal domain of the electron transfer flavoprotein alpha subunit |C-terminal domain of the electron transfer flavoprotein alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d1bd0a2 : (PRO197) (GLY226) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Alanine racemase |Bacillus stearothermophilus [TaxId: 1422]
d2a1tr2 : (LYS216) (ALA254) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4rl0b_ : (LEU209) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d3q6xa_ : (LEU209) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2bm8g_ : (PRO154) (TYR195) [view usage] : c.66.1.50 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |CmcI-like |Cephalosporin hydroxylase CmcI |Streptomyces clavuligerus [TaxId: 1901]
d1fxta_ : (LYS65) (LEU113) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]
d4em8a_ : (ARG4) (HIS41) [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
d2gsja_ : (GLY1) (PHE36) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |automated matches |Parkia platycephala [TaxId: 185447]
d1qyda_ : (ARG6) (ASN42) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Pinoresinol-lariciresinol reductase |Giant arborvitae (Thuja plicata) [TaxId: 3316]
d1ozga2 : (LYS133) (GLY174) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Catabolic acetolactate synthase |Klebsiella pneumoniae [TaxId: 573]
d4em8b_ : (ARG4) (HIS41) [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
d2c31a2 : (SER136) (GLN175) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
d1iova1 : (LYS4) (ASP46) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-Ala-D-Ala ligase, N-domain |Escherichia coli, gene ddlB [TaxId: 562]
d2a1ua2 : (LYS216) (GLY255) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1b0pa1 : (ALA139) (HIS178) [view usage] : c.36.1.8 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |PFOR Pyr module |Pyruvate-ferredoxin oxidoreductase, PFOR, domain I |Desulfovibrio africanus [TaxId: 873]
d1efpa2 : (ARG194) (GLY233) [view usage] : c.31.1.2 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |C-terminal domain of the electron transfer flavoprotein alpha subunit |C-terminal domain of the electron transfer flavoprotein alpha subunit |Paracoccus denitrificans [TaxId: 266]
d1a05a_ : (MET1) (ALA49) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thiobacillus ferrooxidans [TaxId: 920]
d3vgga2 : (PHE369) (GLY420) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Glycosyltrehalose trehalohydrolase, central domain |Sulfolobus solfataricus, km1 [TaxId: 2287]
d1bqqt_ : (GLU1127) (LYS1155) [view usage] : b.40.3.1 |OB-fold |TIMP-like |Tissue inhibitor of metalloproteinases, TIMP |TIMP-2 |Cow (Bos taurus) [TaxId: 9913]
d1w0da_ : (LYS2) (THR45) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Mycobacterium tuberculosis [TaxId: 1773]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, c.56, d.157, c.66, c.77, b.40, c.36, c.31, d.160, d.20, c.121, c.38, c.30