Tableau information
Concept source: d2fcra_ amino acid (a.a.) range (LYS1)(LYS44)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS1) (SER7) E1
(THR13) (LEU24) H2
(LYS27) (ASP33) E3
(ASP39) (LYS44) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 170.4° H2
E3 -17.1° -170.5° E3
H4 -133.1° 41.1° -148.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1rjja_ : (PHE6) (GLN54) [view usage] : d.58.4.4 |Ferredoxin-like |Dimeric alpha+beta barrel |Plant stress-induced protein |Hypothetical protein AT5G22580 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4bofa_ : (LEU232) (MET274) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d2ajta2 : (LEU176) (ILE221) [view usage] : c.85.1.2 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |AraA N-terminal and middle domain-like |L-arabinose isomerase AraA |Escherichia coli [TaxId: 562]
d4n91a_ : (THR31) (GLY87) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Anaerococcus prevoti [TaxId: 525919]
d4nf0g_ : (VAL30) (ALA84) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1vgla_ : (TYR8) (LEU69) [view usage] : c.47.1.15 |Thioredoxin fold |Thioredoxin-like |KaiB-like |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d4ovqa_ : (TRP27) (GLY81) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Roseobacter denitrificans [TaxId: 375451]
d3mama_ : (GLU6) (ASN55) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Osmoprotection protein ProX |Archaeoglobus fulgidus [TaxId: 2234]
d4o94a_ : (ILE27) (LEU82) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316058]
d4bofe_ : (LEU232) (MET274) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d4ne4a_ : (GLN7) (GLY55) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d1sw2a_ : (VAL8) (ASN55) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Osmoprotection protein ProX |Archaeoglobus fulgidus [TaxId: 2234]
d1gpma3 : (LYS465) (THR521) [view usage] : d.52.2.1 |Alpha-lytic protease prodomain-like |GMP synthetase C-terminal dimerisation domain |GMP synthetase C-terminal dimerisation domain |GMP synthetase C-terminal dimerisation domain |Escherichia coli [TaxId: 562]
d1wdea_ : (HIS224) (GLY266) [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Aeropyrum pernix [TaxId: 56636]
d1at1a1 : (VAL43) (LYS83) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d4f2da1 : (LEU176) (ILE221) [view usage] : c.85.1.2 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |AraA N-terminal and middle domain-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4bofb_ : (LEU232) (MET274) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d1s4ma2 : (VAL2) (PRO47) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |FMN adenylyltransferase domain of bifunctional FAD synthetase |Thermotoga maritima [TaxId: 2336]
d3nlla_ : (MET1) (ASN45) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Clostridium beijerinckii [TaxId: 1520]
d4nd9a_ : (GLN7) (GLY55) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d4meva_ : (LEU30) (GLN82) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |TRAP dicarboxylate transporter |Rhodoferax ferrireducens [TaxId: 338969]
d1p74a2 : (ASP2) (GLY54) [view usage] : c.58.1.5 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Shikimate dehydrogenase-like |Shikimate 5-dehydrogenase AroE |Haemophilus influenzae [TaxId: 727]
d1o0pa_ : (GLY430) (ARG472) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor U2AF 65 KDa subunit |Human (Homo sapiens) [TaxId: 9606]
d2cpya1 : (GLY586) (PRO631) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 12 |Human (Homo sapiens) [TaxId: 9606]
d4dqna_ : (PHE235) (PHE277) [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d1npda2 : (TYR7) (PHE49) [view usage] : c.58.1.5 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Shikimate dehydrogenase-like |Putative shikimate dehydrogenase YdiB |Escherichia coli [TaxId: 562]
d1gl9b2 : (GLY447) (ARG498) [view usage] : c.37.1.16 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Helicase-like "domain" of reverse gyrase |Helicase-like "domain" of reverse gyrase |Archaeoglobus fulgidus [TaxId: 2234]
d1lk9a_ : (GLU155) (GLN197) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Alliinase |Garlic (Allium sativum) [TaxId: 4682]
d3toza1 : (THR13) (LEU55) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d3uyya_ : (PHE254) (PHE296) [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Deinococcus radiodurans [TaxId: 1299]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.94, d.58, c.90, c.26, c.23, c.37, c.47, e.17, c.85, d.126, c.78, c.58, d.52