Tableau information
Concept source: d3p7xa_ amino acid (a.a.) range (LEU48)(GLY97)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU48) (PRO53) E1
(GLY58) (ASP70) H2
(VAL78) (ALA83) E3
(PRO86) (GLY97) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -173.0° H2
E3 -22.3° -159.0° E3
H4 113.6° -63.0° 135.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wdka3 : (LYS315) (GLY353) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Fatty oxidation complex alpha subunit, middle domain |Pseudomonas fragi [TaxId: 296]
d1xk7a_ : (ARG16) (PRO56) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB |Escherichia coli [TaxId: 562]
d1xa3a_ : (ARG16) (PRO56) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB |Escherichia coli [TaxId: 562]
d1enoa_ : (LYS19) (GLY66) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Oil seed rape (Brassica napus) [TaxId: 3708]
d4jeqf_ : (PRO6) (LEU48) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d3i44a_ : (LYS253) (THR309) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bartonella henselae [TaxId: 38323]
d4q9na_ : (LYS9) (GLY56) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Chlamydia trachomatis [TaxId: 1340853]
d3q37c_ : (PRO7) (ILE49) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |automated matches |Trypanosoma cruzi [TaxId: 5693]
d1pg8a_ : (ARG152) (GLN195) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Methionine gamma-lyase, MGL |Pseudomonas putida [TaxId: 303]
d3hbfa_ : (LEU14) (LEU58) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
d4kdza_ : (MET1) (ARG46) [view usage] : c.116.1.1 |alpha/beta knot |alpha/beta knot |SpoU-like RNA 2'-O ribose methyltransferase |automated matches |Escherichia coli [TaxId: 364106]
d1d7oa_ : (LYS19) (GLY66) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Oil seed rape (Brassica napus) [TaxId: 3708]
d2c00a1 : (THR76) (LEU112) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d4v06b_ : (ALA395) (ILE439) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gbba_ : (GLN165) (ASN201) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4jaka_ : (MET0) (ARG46) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1f12a2 : (LYS16) (SER54) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Short chain L-3-hydroxyacyl CoA dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d4dyda1 : (THR5) (LYS56) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Acinetobacter baylyi [TaxId: 202950]
d4a6ta_ : (ALA222) (GLY278) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d2o2sa_ : (GLN10) (GLY57) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Toxoplasma gondii [TaxId: 383379]
d1bg6a2 : (LYS5) (GLY47) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |N-(1-D-carboxylethyl)-L-norvaline dehydrogenase |Arthrobacter, strain 1c [TaxId: 1663]
d1j85a_ : (LEU2) (SER47) [view usage] : c.116.1.1 |alpha/beta knot |alpha/beta knot |SpoU-like RNA 2'-O ribose methyltransferase |Hypothetical tRNA/rRNA methyltransfease HI0766 (YibK homologue) |Haemophilus influenzae [TaxId: 727]
d1j5sb_ : (VAL338) (MET377) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uronate isomerase TM0064 |Thermotoga maritima [TaxId: 2336]
d2qora_ : (PRO6) (TYR53) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Plasmodium vivax [TaxId: 5855]
d2gf2c1 : (VAL42) (LYS76) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mlwa_ : (ALA349) (ILE393) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Tryptophan hydroxylase |Human (Homo sapiens) [TaxId: 9606]
d4fn4a_ : (LYS9) (ARG53) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sulfolobus acidocaldarius [TaxId: 330779]
d3e2ta_ : (ALA350) (ILE394) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1ezwa_ : (ILE171) (ALA206) [view usage] : c.1.16.3 |TIM beta/alpha-barrel |Bacterial luciferase-like |F420 dependent oxidoreductases |Coenzyme F420 dependent tetrahydromethanopterin reductase |Methanopyrus kandleri [TaxId: 2320]
d3sdoa_ : (VAL211) (GLY257) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d2v0tb_ : (PRO6) (LEU48) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1r8kb_ : (GLN5) (GLY51) [view usage] : c.77.1.3 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |PdxA-like |4-hydroxythreonine-4-phosphate dehydrogenase PdxA |Salmonella typhimurium [TaxId: 90371]
d1zpda2 : (ALA133) (MET173) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Pyruvate decarboxylase |Zymomonas mobilis [TaxId: 542]
d2gf2a1 : (MET40) (LYS76) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1auoa_ : (ILE108) (ILE158) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Carboxylesterase |Pseudomonas fluorescens [TaxId: 294]
d3gbrb2 : (ALA74) (GLY126) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
d2cc0a1 : (ASP125) (ILE165) [view usage] : c.6.2.3 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |NodB-like polysaccharide deacetylase |Acetyl-xylan esterase |Streptomyces lividans [TaxId: 1916]
d1xk6a1 : (ARG16) (PRO56) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.123, c.67, c.69, c.94, c.2, c.6, c.82, c.77, c.37, c.36, d.178, c.47, c.87, c.116, c.30, c.27