Tableau information
Concept source: d3is3a_ amino acid (a.a.) range (LYS44)(GLY95)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS44) (ALA50) E1
(SER52) (LEU66) H2
(SER68) (ASP76) E3
(VAL80) (GLY95) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 164.5° H2
E3 -25.1° 160.8° E3
H4 158.1° -28.6° 161.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1h44a_ : (ALA254) (GLY321) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1rqpa2 : (ARG8) (PHE66) [view usage] : c.132.1.1 |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |5'-fluoro-5'-deoxyadenosine synthase |Streptomyces cattleya [TaxId: 29303]
d3to5a_ : (PRO85) (ILE126) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Vibrio cholerae [TaxId: 666]
d2hqra1 : (MET1) (ARG43) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85963]
d3nv7a_ : (GLU30) (HIS82) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d2q6la1 : (ASN4) (SER60) [view usage] : c.132.1.0 |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |automated matches |automated matches |Salinispora tropica [TaxId: 369723]
d2v7ta2 : (ARG8) (PHE66) [view usage] : c.132.1.1 |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |automated matches |Streptomyces cattleya [TaxId: 29303]
d4rkqd_ : (THR71) (LEU122) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Arthrobacter sp. [TaxId: 290399]
d1efva2 : (LYS294) (LYS331) [view usage] : c.31.1.2 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |C-terminal domain of the electron transfer flavoprotein alpha subunit |C-terminal domain of the electron transfer flavoprotein alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d2ooka1 : (GLU85) (LEU124) [view usage] : c.13.2.2 |SpoIIaa-like |SpoIIaa-like |Sfri0576-like |Hypothetical protein Sfri0576 |Shewanella frigidimarina [TaxId: 56812]
d1zona_ : (ILE255) (VAL308) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d1h45a_ : (ALA254) (GLY321) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d2puaa2 : (LYS60) (ALA106) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Purine repressor (PurR), C-terminal domain |Escherichia coli [TaxId: 562]
d1eh3a_ : (ALA254) (GLY321) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1chma1 : (VAL75) (LEU115) [view usage] : c.55.2.1 |Ribonuclease H-like motif |Creatinase/prolidase N-terminal domain |Creatinase/prolidase N-terminal domain |Creatinase |Pseudomonas putida [TaxId: 303]
d1tika_ : (LYS136) (GLU204) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |ACP phosphodiesterase AcpD |Escherichia coli [TaxId: 562]
d2d5ia_ : (LYS133) (ALA200) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |ACP phosphodiesterase AcpD |Escherichia coli [TaxId: 562]
d3tcya_ : (GLY92) (PRO150) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Phenylalanine hydroxylase, PAH |Chromobacterium violaceum [TaxId: 536]
d1zesa_ : (ILE77) (ARG122) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli [TaxId: 562]
d1dgqa_ : (TYR257) (GLY311) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d3r23a2 : (ARG2) (ILE47) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-Ala-D-Ala ligase, N-domain |Bacillus anthracis [TaxId: 198094]
d1xrsb1 : (VAL217) (ASN261) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain |Clostridium sticklandii [TaxId: 1511]
d2q3la1 : (LYS85) (TRP123) [view usage] : c.13.2.2 |SpoIIaa-like |SpoIIaa-like |Sfri0576-like |Uncharacterized protein Shew3102 |Shewanella loihica [TaxId: 359303]
d2w22a_ : (PRO10) (GLY73) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Geobacillus thermocatenulatus [TaxId: 33938]
d2h1ic_ : (GLY142) (LYS200) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Carboxylesterase |Bacillus cereus [TaxId: 1396]
d2rslc_ : (ARG2) (LYS54) [view usage] : c.53.1.1 |Resolvase-like |Resolvase-like |gamma,delta resolvase, catalytic domain |gamma,delta resolvase, catalytic domain |Escherichia coli [TaxId: 562]
d1vfda_ : (ALA254) (GLY321) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d3zqkb_ : (ASP1622) (CYS1669) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3n8km_ : (PRO96) (VAL144) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1q50a_ : (HIS294) (SER339) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d2b3sa_ : (GLN21) (LEU82) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2wefa_ : (LYS189) (GLY231) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m5ta_ : (ILE77) (LEU120) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Cell division response regulator DivK |Caulobacter crescentus [TaxId: 155892]
d3cfya_ : (PRO3) (LYS46) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Vibrio parahaemolyticus [TaxId: 223926]
d1w94a1 : (MSE1) (GLU42) [view usage] : c.51.1.2 |Anticodon-binding domain-like |Class II aaRS ABD-related |Brix domain |Probable ribosomal biogenesis protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2xb8a_ : (PRO96) (HIS143) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Mycobacterium tuberculosis [TaxId: 1773]
d3ppya_ : (ASP1622) (GLY1672) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1npya2 : (THR6) (GLY56) [view usage] : c.58.1.5 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Shikimate dehydrogenase-like |Shikimate 5-dehydrogenase-like protein HI0607 |Haemophilus influenzae [TaxId: 727]
d4kq6e_ : (ARG19) (PRO65) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Candida glabrata [TaxId: 284593]
d2cxha1 : (ARG15) (ARG62) [view usage] : c.51.1.2 |Anticodon-binding domain-like |Class II aaRS ABD-related |Brix domain |Probable ribosomal biogenesis protein |Aeropyrum pernix [TaxId: 56636]
d3dona1 : (MET1) (SER53) [view usage] : c.58.1.5 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Shikimate dehydrogenase-like |Shikimate 5-dehydrogenase AroE |Staphylococcus epidermidis [TaxId: 176279]
d1ka9h_ : (MET3) (GLU39) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermus thermophilus [TaxId: 274]
d4o8mg_ : (MET167) (GLY203) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
d4kq6d_ : (ARG19) (PRO65) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Candida glabrata [TaxId: 284593]
d4etla_ : (GLY92) (PRO150) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Phenylalanine hydroxylase, PAH |Chromobacterium violaceum [TaxId: 536]
d3dc7c_ : (ARG23) (ILE79) [view usage] : c.23.10.9 |Flavodoxin-like |SGNH hydrolase |BT2961-like |automated matches |Lactobacillus plantarum [TaxId: 1590]
d2lj8a_ : (PRO84) (ASN143) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1zesc_ : (PRO78) (ARG122) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli [TaxId: 562]
d2v7xa2 : (ARG8) (PHE66) [view usage] : c.132.1.1 |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |automated matches |Streptomyces cattleya [TaxId: 29303]
d3ihwa_ : (PRO192) (ARG253) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ppva_ : (GLN1624) (GLY1672) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4pf8a_ : (LYS166) (GLY201) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Sulfitobacter sp. [TaxId: 314267]
d1jr2a_ : (GLN218) (GLN260) [view usage] : c.113.1.1 |HemD-like |HemD-like |HemD-like |Uroporphyrinogen III synthase (U3S, HemD) |Human (Homo sapiens) [TaxId: 9606]
d2fcjb_ : (GLU5) (GLU49) [view usage] : c.136.1.1 |Toprim domain |Toprim domain |Toprim domain |Hypothetical protein RBSTP2199 |Bacillus stearothermophilus [TaxId: 1422]
d4tkza_ : (LYS3) (VAL52) [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 211110]
d1nyta2 : (THR3) (GLY54) [view usage] : c.58.1.5 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Shikimate dehydrogenase-like |Shikimate 5-dehydrogenase AroE |Escherichia coli [TaxId: 562]
d1rqra2 : (ARG8) (PHE66) [view usage] : c.132.1.1 |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |5'-fluoro-5'-deoxyadenosine synthase |Streptomyces cattleya [TaxId: 29303]
d4o8md_ : (MET167) (GLY203) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
d2fxia_ : (ASP76) (ARG131) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Arsenate reductase ArsC |Staphylococcus aureus [TaxId: 1280]
d3ckma1 : (PRO381) (ASN428) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |YraM C-terminal domain |Haemophilus influenzae [TaxId: 727]
d1kp0a1 : (LYS74) (VAL114) [view usage] : c.55.2.1 |Ribonuclease H-like motif |Creatinase/prolidase N-terminal domain |Creatinase/prolidase N-terminal domain |Creatinase |Actinobacillus sp. [TaxId: 41114]
d2zaya_ : (PRO84) (LEU129) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Desulfuromonas acetoxidans [TaxId: 281689]
d2a1ua2 : (LYS294) (LYS331) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4omua1 : (MET1) (PHE50) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d2icaa_ : (ILE255) (ILE306) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d2jb9b_ : (ILE77) (ILE123) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli [TaxId: 562]
d4kq6g_ : (ARG19) (PRO65) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Candida glabrata [TaxId: 284593]
d1h1lb_ : (ASN82) (LYS141) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Klebsiella pneumoniae [TaxId: 573]
d3svla_ : (LEU112) (PHE182) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1nija1 : (ASP153) (LEU203) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Hypothetical protein YjiA, N-terminal domain |Escherichia coli [TaxId: 562]
d4esma_ : (GLY92) (PRO150) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Phenylalanine hydroxylase, PAH |Chromobacterium violaceum [TaxId: 536]
d3ne4a_ : (GLN111) (GLN166) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pv9b1 : (GLU48) (LYS83) [view usage] : c.55.2.1 |Ribonuclease H-like motif |Creatinase/prolidase N-terminal domain |Creatinase/prolidase N-terminal domain |Aminopeptidase P |Pyrococcus furiosus [TaxId: 2261]
d1td2a_ : (MET2) (ILE70) [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |Pyridoxamine kinase |Escherichia coli [TaxId: 562]
d3dgec_ : (ILE77) (GLU122) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.94, c.2, c.26, c.92, c.80, c.93, c.113, c.72, c.23, c.37, d.178, c.47, c.55, c.31, c.62, c.13, e.7, c.53, c.51,
c.16, e.1, d.109, c.54, c.30, c.58, c.136, c.44, c.132