Tableau information
Concept source: d4pf6a_ amino acid (a.a.) range (ASN171)(ILE199)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN171) (PRO175) E1
(THR177) (LEU187) H2
(ASN190) (ALA195) E3
(ALA195) (ILE199) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 149.7° H2
E3 -37.7° 147.6° E3
H4 -134.4° 39.3° 109.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1hy1b_ : (ASN195) (SER234) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d1i80b_ : (GLN174) (GLY220) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
d2b30b_ : (GLU142) (LYS175) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |automated matches |Plasmodium vivax [TaxId: 5855]
d2prda_ : (ASP102) (GLY174) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Thermus thermophilus [TaxId: 274]
d1vhvb_ : (ASP27) (GLU62) [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Archaeoglobus fulgidus [TaxId: 2234]
d3n26a_ : (ARG31) (LEU82) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Chlamydophila pneumoniae [TaxId: 83558]
d1ixha_ : (LEU4) (ASN48) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Escherichia coli [TaxId: 562]
d4ovsa_ : (GLN164) (VAL193) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Sulfurospirillum deleyianum [TaxId: 525898]
d1em8b_ : (ARG38) (MET78) [view usage] : c.126.1.1 |DNA polymerase III psi subunit |DNA polymerase III psi subunit |DNA polymerase III psi subunit |DNA polymerase III psi subunit |Escherichia coli [TaxId: 562]
d2pfma_ : (ARG178) (LYS247) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2bh1x1 : (GLN37) (GLN81) [view usage] : d.52.10.1 |Alpha-lytic protease prodomain-like |EspE N-terminal domain-like |GSPII protein E N-terminal domain-like |General secretion pathway protein E, EpsE |Vibrio cholerae [TaxId: 666]
d3k4ua_ : (GLY3) (LEU54) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Wolinella succinogenes [TaxId: 844]
d2dgpa_ : (ILE54) (LYS95) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hy1d_ : (ASN195) (SER234) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d4o8ma_ : (MET167) (VAL196) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
d1m1ga3 : (GLY137) (LYS185) [view usage] : d.58.42.1 |Ferredoxin-like |N-utilization substance G protein NusG, N-terminal domain |N-utilization substance G protein NusG, N-terminal domain |N-utilization substance G protein NusG, N-terminal domain |Aquifex aeolicus [TaxId: 63363]
d1vhva_ : (ASP27) (GLU62) [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Archaeoglobus fulgidus [TaxId: 2234]
d1wfxa_ : (VAL119) (ARG152) [view usage] : d.166.1.5 |ADP-ribosylation |ADP-ribosylation |Tpt1/KptA |Probable RNA 2'-phosphotransferase KptA |Aeropyrum pernix [TaxId: 56636]
d2gtda1 : (LYS58) (GLU119) [view usage] : c.55.1.13 |Ribonuclease H-like motif |Actin-like ATPase domain |CoaX-like |Type III pantothenate kinase, CoaX |Thermotoga maritima [TaxId: 2336]
d3zkka_ : (ILE34) (GLN84) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bifidobacterium animalis [TaxId: 580050]
d2cexa_ : (GLY143) (VAL173) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sialic acid-binding protein SiaP |Haemophilus influenzae [TaxId: 727]
d2byfa1 : (PRO75) (GLN110) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |Phospholipase C-epsilon-1 |Human (Homo sapiens) [TaxId: 9606]
d1g2oa_ : (GLN174) (GLY220) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
d1iloa_ : (LYS3) (GLY47) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |MTH985, a thioredoxin |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1gyja_ : (PRO1) (GLN62) [view usage] : d.80.1.1 |Tautomerase/MIF |Tautomerase/MIF |4-oxalocrotonate tautomerase-like |4-oxalocrotonate tautomerase homologue YdcE |Escherichia coli [TaxId: 562]
d1e2ba_ : (LYS3) (GLY45) [view usage] : c.44.2.1 |Phosphotyrosine protein phosphatases I-like |PTS system IIB component-like |PTS system, Lactose/Cellobiose specific IIB subunit |Enzyme IIB-cellobiose |Escherichia coli [TaxId: 562]
d2lxia_ : (ASN2) (GLY45) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s0ya_ : (PRO2) (VAL52) [view usage] : d.80.1.1 |Tautomerase/MIF |Tautomerase/MIF |4-oxalocrotonate tautomerase-like |Trans-3-chloroacrylic acid dehalogenase alpha-subunit, CaaD1 |Pseudomonas pavonaceae [TaxId: 47881]
d2fafa1 : (THR110) (ARG149) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3qvga_ : (THR889) (ARG916) [view usage] : c.15.1.2 |BRCT domain |BRCT domain |DNA ligase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nf2a_ : (VAL109) (GLY144) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Hypothetical protein TM0651 |Thermotoga maritima [TaxId: 2336]
d2y7ia_ : (ARG23) (LEU74) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d3niwa_ : (ALA113) (ILE146) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d4qjbb_ : (GLU134) (GLY166) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d1re5d_ : (LEU188) (GLN259) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |3-carboxy-cis,cis-muconate cycloisomerase (CMLE) |Pseudomonas putida, strain KT2440 [TaxId: 303]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, d.58, c.108, c.90, c.56, a.127, b.40, c.47, c.55, d.166, c.109, d.15, c.44, c.15, d.52, d.80, c.126