Tableau information
Concept source: d3rh5a3 amino acid (a.a.) range (GLU172)(HIS222)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU172) (VAL177) E1
(GLY179) (GLY184) H2
(ASP190) (PRO198) E3
(LEU211) (HIS222) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 81.0° H2
E3 158.9° -91.3° E3
H4 -68.1° 83.9° 130.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3cfwa1 : (THR2) (LEU42) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nbub_ : (ARG4) (SER45) [view usage] : d.96.1.3 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |DHN aldolase/epimerase |7,8-dihydroneopterin aldolase |Mycobacterium tuberculosis [TaxId: 1773]
d1g1qa1 : (THR2) (LEU42) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |P-selectin, C-lectin domain |Human (Homo sapiens) [TaxId: 9606]
d3d7ab_ : (GLU84) (TRP126) [view usage] : d.77.1.0 |RL5-like |RL5-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1llfa_ : (LEU98) (PRO134) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Type-B carboxylesterase/lipase |Candida cylindracea, cholesterol esterase [TaxId: 44322]
d3ah7a_ : (MET0) (HIS34) [view usage] : d.15.4.0 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d2gt3a_ : (TYR66) (SER106) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |automated matches |Escherichia coli [TaxId: 562]
d3d7aa_ : (GLU84) (TRP126) [view usage] : d.77.1.0 |RL5-like |RL5-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1c5ka2 : (GLY111) (PHE154) [view usage] : c.51.2.1 |Anticodon-binding domain-like |TolB, N-terminal domain |TolB, N-terminal domain |TolB, N-terminal domain |Escherichia coli [TaxId: 562]
d2ogkb_ : (LEU96) (LEU142) [view usage] : d.77.1.2 |RL5-like |RL5-like |SSO1042-like |Hypothetical protein AF2318 |Archaeoglobus fulgidus [TaxId: 2234]
d1x1ma1 : (TRP13) (GLN59) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like protein 7 |Mouse (Mus musculus) [TaxId: 10090]
d1eg1a_ : (ARG39) (GLY81) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Endoglucanase I [TaxId: 51453]
d3n5md_ : (GLY405) (ILE449) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2sici_ : (ALA11) (VAL56) [view usage] : d.84.1.1 |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Streptomyces albogriseolus, s-3253 [TaxId: 1887]
d1vs6h2 : (GLN2) (LYS57) [view usage] : d.100.1.1 |MbtH/L9 domain-like |L9 N-domain-like |Ribosomal protein L9 N-domain |Ribosomal protein L9 N-domain |Escherichia coli [TaxId: 562]
d1ojia_ : (HIS38) (GLY85) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Humicola insolens, Cel7b [TaxId: 34413]
d1bv8a_ : (GLU1) (ASN41) [view usage] : b.1.29.1 |Immunoglobulin-like beta-sandwich |Macroglobulin |Alpha-macroglobulin receptor domain |alpha-2-macroglobulin |Human (Homo sapiens) [TaxId: 9606]
d2gbkc_ : (MET1) (LYS40) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vs6o1 : (ILE35) (GLU84) [view usage] : c.55.4.1 |Ribonuclease H-like motif |Translational machinery components |Ribosomal protein L18 and S11 |Ribosomal protein L18 (L18p) |Escherichia coli [TaxId: 562]
d3bboj1 : (LYS51) (ALA118) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d2dsqb_ : (GLY56) (GLN89) [view usage] : g.3.9.1 |Knottins (small inhibitors, toxins, lectins) |Growth factor receptor domain |Growth factor receptor domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2a7lb_ : (SER68) (LEU116) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin-protein ligase W (E2 W) |Human (Homo sapiens) [TaxId: 9606]
d2w8ba1 : (GLY110) (GLY158) [view usage] : c.51.2.0 |Anticodon-binding domain-like |TolB, N-terminal domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3kzga_ : (ASN107) (SER143) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d3sici_ : (TYR7) (GLY57) [view usage] : d.84.1.1 |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Streptomyces lividans [TaxId: 1916]
d2gbkd_ : (MET1) (LYS40) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.69, c.94, d.58, i.1, b.29, c.55, d.169, d.96, b.1, d.20, c.51, d.15, d.218, d.77, g.3, d.84, d.100