Tableau information
Concept source: d4mafc2 amino acid (a.a.) range (LYS272)(GLY341)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS272) (TYR284) E1
(LEU292) (GLY306) H2
(THR313) (ILE317) E3
(GLY326) (GLY341) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 158.4° H2
E3 -20.6° -176.2° E3
H4 127.4° -61.2° 116.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4gnib1 : (ALA153) (ASP195) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d3oxnb_ : (GLN116) (GLY165) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Vibrio parahaemolyticus [TaxId: 670]
d3tqua_ : (LEU2) (GLY62) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]
d1lbeb_ : (LYS191) (PRO243) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |California sea hare (Aplysia californica) [TaxId: 6500]
d4f6ra1 : (ARG64) (HIS107) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d1tuba1 : (ALA65) (THR109) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin alpha-subunit |Pig (Sus scrofa) [TaxId: 9823]
d3a2wa_ : (GLU183) (ALA234) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
d1hkca4 : (ASP852) (GLU914) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
d4erhb_ : (SER258) (LEU328) [view usage] : d.79.7.0 |Bacillus chorismate mutase-like |OmpA-like |automated matches |automated matches |Salmonella enterica [TaxId: 588858]
d3koub_ : (GLN225) (GLN276) [view usage] : c.23.14.0 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d4il2b2 : (VAL128) (PRO182) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |D-mannonate dehydratase |Escherichia coli [TaxId: 199310]
d2xd2b_ : (GLU42) (LYS83) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1iula_ : (LEU97) (LEU133) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Hypothetical protein TT1466 |Thermus thermophilus [TaxId: 274]
d1l2fa4 : (ASN55) (GLN126) [view usage] : d.202.1.1 |Transcription factor NusA, N-terminal domain |Transcription factor NusA, N-terminal domain |Transcription factor NusA, N-terminal domain |Transcription factor NusA, N-terminal domain |Thermotoga maritima [TaxId: 2336]
d2xd2a_ : (LYS41) (LYS83) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1sw1a_ : (GLU6) (ARG54) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Osmoprotection protein ProX |Archaeoglobus fulgidus [TaxId: 2234]
d4efha2 : (ASN296) (LEU349) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Acanthamoeba castellanii [TaxId: 5755]
d1y7he_ : (LYS5) (LEU60) [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2pyua_ : (HIS0) (THR61) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1m5sa1 : (LYS19) (GLY68) [view usage] : d.58.33.1 |Ferredoxin-like |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Methanosarcina barkeri [TaxId: 2208]
d3nyib_ : (PRO83) (GLY142) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium ventriosum [TaxId: 411463]
d4iubs_ : (GLU76) (GLN130) [view usage] : e.19.1.0 |HydA/Nqo6-like |HydA/Nqo6-like |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d1cnza_ : (ASN4) (ASN52) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Salmonella typhimurium [TaxId: 90371]
d1aiva2 : (ARG344) (GLY387) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d1iuka_ : (LEU97) (GLY136) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Hypothetical protein TT1466 |Thermus thermophilus [TaxId: 274]
d2yhxa_ : (PRO132) (ASP201) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Hexokinase |Baker's yeast (Saccharomyces cerevisiae), BIII [TaxId: 4932]
d1kxpa2 : (ALA295) (LEU349) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1ia0a_ : (ALA65) (THR109) [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Kif1a head-microtubule complex |interspecies complex: Mus musculus and Sus scrofa
d1xklb_ : (LYS5) (LEU60) [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1bvha_ : (ASP86) (VAL156) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Cow (Bos taurus) [TaxId: 9913]
d4gnia1 : (ALA153) (ALA193) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d1g62a_ : (THR22) (THR63) [view usage] : d.126.1.1 |Pentein, beta/alpha-propeller |Pentein |Ribosome anti-association factor eIF6 (aIF6) |Ribosome anti-association factor eIF6 (aIF6) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1g62a_ : (ARG68) (ILE108) [view usage] : d.126.1.1 |Pentein, beta/alpha-propeller |Pentein |Ribosome anti-association factor eIF6 (aIF6) |Ribosome anti-association factor eIF6 (aIF6) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1g62a_ : (GLN157) (MET197) [view usage] : d.126.1.1 |Pentein, beta/alpha-propeller |Pentein |Ribosome anti-association factor eIF6 (aIF6) |Ribosome anti-association factor eIF6 (aIF6) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3k7ob_ : (ARG3) (VAL53) [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d1qhwa_ : (THR27) (ASP82) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Mammalian purple acid phosphatase |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.94, c.2, d.159, d.58, c.26, c.77, c.23, c.47, c.55, c.32, d.126, c.121, c.51, d.79, i.12, i.10, e.19, c.119,
c.44, d.202