Tableau information
Concept source: d3ec9b_ amino acid (a.a.) range (ALA39)(GLU70)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA39) (MSE45) E1
(PHE48) (ALA51) H2
(GLY52) (SER56) E3
(SER56) (GLU70) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -97.9° H2
E3 153.8° 99.5° E3
H4 25.9° 109.3° -128.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wbba4 : (TYR37) (GLY87) [view usage] : d.75.2.0 |MutS N-terminal domain-like |DNA repair protein MutS, domain I |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1pzwa_ : (MET16) (THR80) [view usage] : g.39.1.10 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |Transcription factor grauzone Cg33133-Pa, zinc finger associated domain |Transcription factor grauzone Cg33133-Pa, zinc finger associated domain |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4stda_ : (PRO44) (SER72) [view usage] : d.17.4.1 |Cystatin-like |NTF2-like |Scytalone dehydratase |Scytalone dehydratase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d1vcza_ : (ASP35) (HIS97) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |automated matches |Nicotiana glutinosa [TaxId: 35889]
d2l1ga_ : (PRO19) (PHE63) [view usage] : g.39.1.0 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1iyba_ : (ASP35) (GLY98) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |RNase NW |Nicotiana glutinosa [TaxId: 35889]
d1uu2b_ : (ASN282) (PHE334) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d1idpa_ : (PRO44) (SER72) [view usage] : d.17.4.1 |Cystatin-like |NTF2-like |Scytalone dehydratase |Scytalone dehydratase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d3ec9a1 : (ALA39) (GLU70) [view usage] : d.17.4.10 |Cystatin-like |NTF2-like |PhzA/PhzB-like |Uncharacterized protein BTHI0051 |Burkholderia thailandensis [TaxId: 57975]
d1iqqa_ : (TYR3) (PRO69) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |S3-RNase |Japanese pear (Pyrus pyrifolia) [TaxId: 3767]
d1s1if_ : (LEU82) (GLU130) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1uu0b_ : (ASN282) (LYS335) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d1v8cb1 : (PRO1) (TYR36) [view usage] : d.15.3.1 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |MoaD |MoaD-related protein, N-terminal domain |Thermus thermophilus [TaxId: 274]
d2f8jb_ : (ASN282) (PHE334) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d3stda_ : (PRO44) (SER72) [view usage] : d.17.4.1 |Cystatin-like |NTF2-like |Scytalone dehydratase |Scytalone dehydratase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d1ikxb_ : (ASP1250) (LEU1310) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1jqga2 : (GLY9) (ARG61) [view usage] : d.58.3.1 |Ferredoxin-like |Protease propeptides/inhibitors |Pancreatic carboxypeptidase, activation domain |Procarboxypeptidase A |Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]
d1e3ma4 : (TYR37) (GLY87) [view usage] : d.75.2.1 |MutS N-terminal domain-like |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |Escherichia coli [TaxId: 562]
d2p2ea1 : (ASN23) (ASN65) [view usage] : b.124.1.1 |HesB-like domain |HesB-like domain |HesB-like domain |Putative Fe-S biosynthesis protein LSL1730 |Lactobacillus salivarius [TaxId: 1624]
d3ec9b_ : (ALA39) (GLU70) [view usage] : d.17.4.10 |Cystatin-like |NTF2-like |PhzA/PhzB-like |Uncharacterized protein BTHI0051 |Burkholderia thailandensis [TaxId: 57975]
d1h1ca_ : (ASN282) (GLU332) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.67, d.58, i.1, d.17, d.124, d.15, g.39, b.124, d.75