Tableau information
Concept source: d4koda3 amino acid (a.a.) range (ARG239)(SER276)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG239) (GLY245) E1
(LYS251) (GLY263) H2
(PHE265) (ASN270) E3
(ASN270) (SER276) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 142.1° H2
E3 -48.2° -165.3° E3
H4 -104.2° -101.9° 63.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2hcba2 : (PRO114) (GLY162) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Chromosomal replication initiation factor DnaA |Aquifex aeolicus [TaxId: 63363]
d4if6a_ : (MET-1) (GLY269) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b6ra2 : (LEU127) (HIS191) [view usage] : d.128.1.2 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |Guanido kinase catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mppa_ : (ASP105) (GLU131) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin |Mucor pusillus [TaxId: 4840]
d1vhla_ : (SER0) (GLU41) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Escherichia coli [TaxId: 562]
d4koda3 : (ARG239) (SER276) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rkba_ : (MET1) (GLU40) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]
d1crka2 : (LEU122) (HIS186) [view usage] : d.128.1.2 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |Guanido kinase catalytic domain |Creatine kinase, C-terminal domain |Chicken (Gallus gallus), mitochondria [TaxId: 9031]
d4kode3 : (ARG239) (SER276) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ni4b1 : (SER0) (ASP34) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |E1-beta subunit of pyruvate dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d4i36a_ : (HIS215) (GLY253) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
d2feoa_ : (PRO124) (ARG157) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Escherichia coli [TaxId: 562]
d1wu7b2 : (HIS122) (GLY174) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Histidyl-tRNA synthetase (HisRS) |Thermoplasma acidophilum [TaxId: 2303]
d3uxmd_ : (LEU4) (LEU54) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3h4ma_ : (LYS205) (VAL241) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d1d2na_ : (LEU544) (ILE582) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein |Chinese hamster (Cricetulus griseus) [TaxId: 10029]
d2oplb1 : (MSE65) (GLY129) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein GSU2788 |Geobacter sulfurreducens [TaxId: 35554]
d3v8bc_ : (GLY222) (ARG260) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1u6ra2 : (SER128) (HIS190) [view usage] : d.128.1.2 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |Guanido kinase catalytic domain |Creatine kinase, C-terminal domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d4i36b_ : (SER216) (GLY253) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
d1zp6a1 : (GLY9) (ILE49) [view usage] : c.37.1.25 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Atu3015-like |Hypothetical protein Atu3015 |Agrobacterium tumefaciens [TaxId: 358]
d1zm7b_ : (THR22) (ASN59) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3q31a_ : (THR229) (ALA267) [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Fungus (Aspergillus oryzae) [TaxId: 5062]
d1pvya_ : (THR182) (TYR220) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |Methanocaldococcus jannaschii [TaxId: 2190]
d1l8qa2 : (LEU111) (GLY162) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Chromosomal replication initiation factor DnaA |Aquifex aeolicus [TaxId: 63363]
d1s96b_ : (LEU6) (TYR54) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Guanylate kinase |Escherichia coli [TaxId: 562]
d1sija4 : (GLN409) (GLN455) [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Aldehyde oxidoreductase |Desulfovibrio gigas [TaxId: 879]
d1ko5a_ : (ASP7) (GLY54) [view usage] : c.37.1.17 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Gluconate kinase |Gluconate kinase |Escherichia coli [TaxId: 562]
d4edha_ : (THR2) (LEU54) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1ofha_ : (ASN52) (GLU88) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |HslU |Haemophilus influenzae [TaxId: 727]
d3jpza2 : (LYS114) (HIS178) [view usage] : d.128.1.0 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |automated matches |automated matches |Innkeeper worm (Urechis caupo) [TaxId: 6431]
d1wu7a2 : (TYR123) (THR176) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Histidyl-tRNA synthetase (HisRS) |Thermoplasma acidophilum [TaxId: 2303]
d3r20a_ : (SER5) (GLY51) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1cl2a_ : (PHE311) (ARG359) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystathionine beta-lyase, CBL |Escherichia coli [TaxId: 562]
d1zm7a_ : (THR22) (ASN59) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.2, b.74, b.50, c.37, c.36, d.104, c.89, c.31, d.133, d.128, d.227, d.115