Tableau information
Concept source: d2bp7b2 amino acid (a.a.) range (GLY270)(PHE323)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY270) (GLU277) E1
(GLY285) (HIS295) H2
(ILE304) (THR308) E3
(GLU319) (PHE323) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 168.1° H2
E3 -13.1° 170.2° E3
H4 -151.3° 16.9° -156.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1q7ra_ : (MSE1) (GLY37) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Hypothetical protein YaaE |Bacillus stearothermophilus [TaxId: 1422]
d1ezoa_ : (GLY5) (PHE47) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d3nhza_ : (GLN6) (ALA41) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2hhld_ : (VAL140) (GLU185) [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2exra2 : (ASP240) (PRO293) [view usage] : d.58.32.0 |Ferredoxin-like |FAD-linked oxidases, C-terminal domain |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2b34a_ : (PRO53) (GLU95) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d4h2db_ : (PHE92) (LEU156) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3fcca_ : (SER52) (GLU95) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
d4psxa_ : (LYS64) (HIS115) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HAT1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2ov1a_ : (ASP50) (ALA98) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Synechocystis sp. [TaxId: 1143]
d2abwb_ : (GLU3) (CYS44) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d4h2da_ : (PHE92) (TYR157) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g7ra3 : (VAL354) (LEU397) [view usage] : c.20.1.1 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d3nhzb_ : (GLN6) (ALA41) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d4c20b1 : (PRO102) (LEU157) [view usage] : c.85.1.0 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d3stgb_ : (PHE55) (CYS98) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Neisseria meningitidis [TaxId: 122586]
d1h1la_ : (ILE373) (LYS415) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Klebsiella pneumoniae [TaxId: 573]
d1q50a_ : (THR387) (TYR444) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d2nv2l_ : (MET1) (GLU38) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]
d1y7pb2 : (GLY-1) (LYS46) [view usage] : d.58.18.12 |Ferredoxin-like |ACT-like |AF1403 N-terminal domain-like |Hypothetical protein AF1403, N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d1xvla1 : (LYS55) (ALA104) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Mn transporter MntC |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1xvlb_ : (LYS55) (ALA104) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Mn transporter MntC |Synechocystis sp. PCC 6803 [TaxId: 1148]
d2ywja_ : (MET1) (GLY37) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1zgha2 : (ASN2) (THR39) [view usage] : c.65.1.1 |Formyltransferase |Formyltransferase |Formyltransferase |Methionyl-tRNAfmet formyltransferase |Clostridium thermocellum [TaxId: 1515]
d3ujpc_ : (LYS55) (ALA104) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d3nhzc_ : (GLN6) (ALA41) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1ox4a2 : (PRO2) (ASN38) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]
d1svqa_ : (LEU196) (PRO242) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Severin, domain 2 |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1qwta_ : (GLY225) (LEU268) [view usage] : b.26.1.3 |SMAD/FHA domain |SMAD/FHA domain |Interferon regulatory factor 3 (IRF3), transactivation domain |Interferon regulatory factor 3 (IRF3), transactivation domain |Human (Homo sapiens) [TaxId: 9606]
d1g7sa3 : (VAL354) (ASP400) [view usage] : c.20.1.1 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1sqsa_ : (LYS117) (GLY179) [view usage] : c.23.5.5 |Flavodoxin-like |Flavoproteins |Hypothetical protein SP1951 |Hypothetical protein SP1951 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3dgfc_ : (ILE77) (ASN121) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d3fxba_ : (TRP3) (GLY55) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]
d1rfla_ : (LEU115) (SER166) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Probable tRNA modification GTPase TrmE (MnmE), G domain |Escherichia coli [TaxId: 562]
d2vika_ : (PHE57) (LYS111) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Villin, domain 1 (res. 1-126) |Chicken (Gallus gallus) [TaxId: 9031]
d2nv2f_ : (LEU2) (GLU38) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, d.58, c.108, c.92, c.80, c.23, c.37, c.85, e.23, d.108, c.33, b.26, d.109, c.65, c.48, c.20