Tableau information
Concept source: d1e6ua_ amino acid (a.a.) range (GLN4)(SER53)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN4) (GLY10) E1
(VAL15) (ARG26) H2
(GLU30) (THR35) E3
(ASP43) (SER53) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -158.9° H2
E3 -20.1° -151.5° E3
H4 160.6° 9.2° 159.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fxwa_ : (GLY137) (LEU215) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d1f2oa_ : (LYS78) (LEU145) [view usage] : c.56.5.4 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Bacterial dinuclear zinc exopeptidases |Aminopeptidase |Streptomyces griseus [TaxId: 1911]
d1crza2 : (ILE16) (GLY74) [view usage] : c.51.2.1 |Anticodon-binding domain-like |TolB, N-terminal domain |TolB, N-terminal domain |TolB, N-terminal domain |Escherichia coli [TaxId: 562]
d1d7aa_ : (PRO87) (LEU137) [view usage] : c.23.8.1 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |Escherichia coli [TaxId: 562]
d1t35e_ : (GLY33) (GLN76) [view usage] : c.129.1.1 |MCP/YpsA-like |MCP/YpsA-like |MoCo carrier protein-like |Hypothetical protein YvdD |Bacillus subtilis [TaxId: 1423]
d3rkta_ : (PRO199) (ALA256) [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
d1ig0a2 : (ASN92) (SER140) [view usage] : c.100.1.1 |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2yzua_ : (LYS3) (TYR48) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2w2db2 : (ARG565) (LYS596) [view usage] : h.4.2.1 |Antiparallel coiled-coil |Clostridium neurotoxins, "coiled-coil" domain |Clostridium neurotoxins, "coiled-coil" domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
d1t35a_ : (GLY33) (GLN76) [view usage] : c.129.1.1 |MCP/YpsA-like |MCP/YpsA-like |MoCo carrier protein-like |Hypothetical protein YvdD |Bacillus subtilis [TaxId: 1423]
d1bwra_ : (GLY137) (LEU215) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d1g7ra3 : (GLY404) (GLU458) [view usage] : c.20.1.1 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1r1da_ : (PRO183) (SER243) [view usage] : c.69.1.29 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/lipase |Carboxylesterase Est |Bacillus stearothermophilus [TaxId: 1422]
d1d5ta1 : (LYS278) (MET424) [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |Guanine nucleotide dissociation inhibitor, GDI |Cow (Bos taurus) [TaxId: 9913]
d3muna2 : (SER613) (GLY682) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d1be1a_ : (ILE86) (LEU134) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Glutamate mutase, small subunit |Clostridium tetanomorphum [TaxId: 1553]
d2hqsa2 : (ILE38) (GLY96) [view usage] : c.51.2.1 |Anticodon-binding domain-like |TolB, N-terminal domain |TolB, N-terminal domain |TolB, N-terminal domain |Escherichia coli [TaxId: 562]
d1jjia_ : (LEU248) (VAL309) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Carboxylesterase |Archaeoglobus fulgidus [TaxId: 2234]
d2h1ia1 : (GLY142) (ALA201) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Carboxylesterase |Bacillus cereus [TaxId: 1396]
d2kqua_ : (LYS81) (PHE167) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Anabaena sp. [TaxId: 1168]
d1ig0b2 : (ASN92) (SER140) [view usage] : c.100.1.1 |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3zqua_ : (PRO133) (GLY191) [view usage] : c.34.1.0 |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1vl0a_ : (MSE1) (LYS51) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |DTDP-4-dehydrorhamnose reductase RfbD |Clostridium acetobutylicum [TaxId: 1488]
d4bl5b_ : (TYR-4) (LYS60) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ivma2 : (SER613) (GLY682) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d2nzxc_ : (ALA183) (GLN231) [view usage] : c.87.1.11 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |FucT-like |Alpha1,3-fucosyltransferase FucT |Helicobacter pylori [TaxId: 210]
d1xvlb_ : (ASP105) (LEU176) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Mn transporter MntC |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1jt2a_ : (LEU222) (GLY280) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Feruloyl esterase domain of the cellulosomal xylanase z |Clostridium thermocellum [TaxId: 1515]
d3ujpc_ : (ASP105) (ASP177) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d2h1ib_ : (LYS143) (PHE202) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Carboxylesterase |Bacillus cereus [TaxId: 1396]
d4ndne_ : (ARG18) (GLN75) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sg0a_ : (ILE25) (LYS86) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316058]
d4grda_ : (VAL92) (GLY145) [view usage] : c.23.8.0 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2jbab_ : (PRO78) (ARG122) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli [TaxId: 562]
d1g7sa3 : (GLY404) (GLU458) [view usage] : c.20.1.1 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2qjac_ : (GLU70) (LEU111) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |BMP receptor Ia ectodomain |Human (Homo sapiens) [TaxId: 9606]
d1euca2 : (VAL242) (LYS304) [view usage] : c.23.4.1 |Flavodoxin-like |Succinyl-CoA synthetase domains |Succinyl-CoA synthetase domains |Succinyl-CoA synthetase, alpha-chain, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2hu5b2 : (PRO515) (ARG581) [view usage] : c.69.1.33 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acylamino-acid-releasing enzyme, C-terminal donain |Acylamino-acid-releasing enzyme, C-terminal donain |Aeropyrum pernix [TaxId: 56636]
d2r8ba1 : (ARG187) (PHE241) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Uncharacterized protein Atu2452 |Agrobacterium tumefaciens [TaxId: 358]
d1sbzb_ : (ARG115) (ASP171) [view usage] : c.34.1.1 |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Probable aromatic acid decarboxylase Pad1 |Escherichia coli O157:H7 [TaxId: 83334]
d1auoa_ : (PRO159) (ARG216) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Carboxylesterase |Pseudomonas fluorescens [TaxId: 294]
d4rn7a_ : (TYR117) (SER187) [view usage] : c.56.5.0 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |automated matches |automated matches |Peptoclostridium difficile [TaxId: 272563]
d3b5eb_ : (ARG159) (GLY214) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Uncharacterized protein Mll8374 |Mesorhizobium loti [TaxId: 381]
d2k2ga_ : (ASP158) (GLY225) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
d2d0ob1 : (ILE10) (SER57) [view usage] : c.51.3.2 |Anticodon-binding domain-like |B12-dependent dehydatase associated subunit |Dehydratase-reactivating factor beta subunit |Diol dehydratase-reactivating factor small subunit DdrB |Klebsiella oxytoca [TaxId: 571]
d1vl0b_ : (MSE1) (LYS51) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |DTDP-4-dehydrorhamnose reductase RfbD |Clostridium acetobutylicum [TaxId: 1488]
d3f9ra_ : (GLU200) (LYS246) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d2r8bb_ : (ARG187) (PHE241) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Uncharacterized protein Atu2452 |Agrobacterium tumefaciens [TaxId: 358]
d1c7qa_ : (ASN318) (GLY407) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Bacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.2, c.108, c.56, c.92, c.80, d.92, c.93, c.23, c.47, c.87, c.51, c.3, c.34, c.129, h.4, c.100, g.7, c.20