Tableau information
Concept source: d2zyqa1 amino acid (a.a.) range (THR86)(HIS119)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR86) (GLU90) E1
(THR92) (ARG100) H2
(ASP102) (ALA108) E3
(ASN113) (HIS119) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -80.2° H2
E3 145.8° 109.0° E3
E4 -50.3° -76.0° 162.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2gyya2 : (PHE203) (GLU259) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2zu0a_ : (ILE65) (GLY103) [view usage] : b.80.6.1 |Single-stranded right-handed beta-helix |Stabilizer of iron transporter SufD |Stabilizer of iron transporter SufD |Stabilizer of iron transporter SufD |Escherichia coli [TaxId: 562]
d1f82a_ : (VAL2) (PRO46) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype B [TaxId: 1491]
d2fc2a_ : (TYR129) (GLU182) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Bacillus subtilis [TaxId: 1423]
d1qwza_ : (ASN180) (SER244) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
d1g1ba_ : (GLY53) (PRO95) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d1x0gc_ : (MET1) (LEU46) [view usage] : b.124.1.0 |HesB-like domain |HesB-like domain |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1nugb2 : (GLU546) (ASN593) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d2gdza1 : (TYR216) (TYR256) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |15-hydroxyprostaglandin dehydrogenase, PGDH |Human (Homo sapiens) [TaxId: 9606]
d2wata_ : (ALA1846) (LYS1886) [view usage] : d.150.1.0 |4'-phosphopantetheinyl transferase |4'-phosphopantetheinyl transferase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1l9na2 : (GLU546) (ASN593) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d3bdwc_ : (ILE117) (ASP163) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |CD94 |Human (Homo sapiens) [TaxId: 9606]
d1l9mb2 : (GLU546) (ASN593) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d1lxya_ : (LYS254) (TYR284) [view usage] : d.126.1.4 |Pentein, beta/alpha-propeller |Pentein |Arginine deiminase |Arginine deiminase |Mycoplasma arginini [TaxId: 2094]
d1zs7a2 : (GLY8) (ILE59) [view usage] : d.17.6.4 |Cystatin-like |Pre-PUA domain |Hypothetical protein APE0525, N-terminal domain |Hypothetical protein APE0525, N-terminal domain |Aeropyrum pernix [TaxId: 56636]
d1l9ma2 : (GLU546) (ASN593) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d1wida_ : (GLN249) (SER292) [view usage] : b.142.1.2 |DNA-binding pseudobarrel domain |DNA-binding pseudobarrel domain |B3 DNA binding domain |DNA-binding protein RAV1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1i80a_ : (THR49) (GLY87) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
d3bdwa_ : (ILE117) (ASP163) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |CD94 |Human (Homo sapiens) [TaxId: 9606]
d1sh8b_ : (ILE95) (SER146) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA5026 |Pseudomonas aeruginosa [TaxId: 287]
d1j9ct1 : (THR55) (PRO102) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Extracellular region of human tissue factor |Human (Homo sapiens) [TaxId: 9606]
d1epwa3 : (VAL2) (PRO46) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype B [TaxId: 1491]
d1eq6a_ : (THR132) (PRO177) [view usage] : d.107.1.1 |Mog1p/PsbP-like |Mog1p/PsbP-like |Ran-binding protein mog1p |Ran-binding protein mog1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1g2oa_ : (THR49) (GLY87) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
d1boya1 : (THR55) (PRO102) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Extracellular region of human tissue factor |Human (Homo sapiens) [TaxId: 9606]
d1ex0b2 : (SER581) (LEU627) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1z7ha_ : (ILE3) (PRO47) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Clostridium tetani [TaxId: 1513]
d2zu0b_ : (ILE65) (GLY103) [view usage] : b.80.6.1 |Single-stranded right-handed beta-helix |Stabilizer of iron transporter SufD |Stabilizer of iron transporter SufD |Stabilizer of iron transporter SufD |Escherichia coli [TaxId: 562]
d3dh1b_ : (ASN13) (ASN60) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kfia1 : (TYR167) (VAL202) [view usage] : c.84.1.1 |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Exocytosis-sensitive phosphoprotein, pp63/parafusin |Ciliate (Paramecium tetraurelia) [TaxId: 5888]
d1evub2 : (SER581) (LEU627) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1wfta_ : (THR69) (GLN113) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Host cell factor 2, HCF-2 |Mouse (Mus musculus) [TaxId: 10090]
d1chpd_ : (SER26) (VAL50) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Cholera toxin |Vibrio cholerae [TaxId: 666]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.2, c.56, d.92, b.40, d.169, d.81, d.174, d.32, b.1, d.126, c.97, d.17, d.38, d.150, c.84, b.100, b.124, d.107, d.190,
b.142