Tableau information
Concept source: d3s2sa_ amino acid (a.a.) range (ASP124)(SER162)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP124) (GLY130) E1
(LEU132) (GLY148) H2
(GLN150) (VAL154) E3
(VAL158) (SER162) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 172.9° H2
E3 -27.1° 159.9° E3
E4 47.1° -127.8° -69.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nspa_ : (ASN29) (GLU70) [view usage] : b.80.1.5 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectin methylesterase |automated matches |Erwinia chrysanthemi [TaxId: 198628]
d3irva_ : (ASP167) (PRO207) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Pseudomonas syringae [TaxId: 264730]
d4jbeb_ : (PRO202) (ASP232) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Saccharomonospora viridis [TaxId: 471857]
d3twaa2 : (ASP122) (ASN180) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Salmonella enterica [TaxId: 550537]
d4jbea_ : (PRO202) (ASP232) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Saccharomonospora viridis [TaxId: 471857]
d1fgua2 : (GLN299) (ILE322) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Replication protein A 70 KDa subunit (RPA70) |Human (Homo sapiens) [TaxId: 9606]
d3t6ca2 : (ASP120) (ASN178) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Pantoea ananatis [TaxId: 706191]
d1cdoa2 : (ASP264) (LEU298) [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Alcohol dehydrogenase |Cod (Gadus callarias) [TaxId: 8053]
d4a17i_ : (LYS4) (GLY44) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1qpna2 : (SER38) (GLY81) [view usage] : d.41.2.1 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |NadC N-terminal domain-like |Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
d1lfpa_ : (SER205) (PRO241) [view usage] : e.39.1.1 |YebC-like |YebC-like |YebC-like |Hypothetical protein aq1575 |Aquifex aeolicus [TaxId: 63363]
d2zkrj1 : (LEU6) (GLY44) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Dog (Canis familiaris) [TaxId: 9615]
d2f8sa2 : (GLY391) (LYS429) [view usage] : c.55.3.10 |Ribonuclease H-like motif |Ribonuclease H-like |PIWI domain |automated matches |Aquifex aeolicus [TaxId: 63363]
d1ru4a_ : (LYS39) (GLN89) [view usage] : b.80.1.9 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate transeliminase |Pectate transeliminase |Erwinia chrysanthemi [TaxId: 556]
d1djqa1 : (VAL27) (ASN64) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Trimethylamine dehydrogenase, N-terminal domain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d3r2jc_ : (ARG149) (ASP187) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Leishmania infantum [TaxId: 5671]
d3tb4a_ : (ASP139) (PHE176) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
d2j01n1 : (GLU10) (THR63) [view usage] : c.21.1.1 |Ribosomal protein L13 |Ribosomal protein L13 |Ribosomal protein L13 |Ribosomal protein L13 |Thermus thermophilus [TaxId: 274]
d3tg2a_ : (ASP139) (PHE176) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
d1s1im_ : (VAL5) (GLY44) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.1, c.2, i.1, c.82, b.40, c.55, c.33, d.41, e.39, c.21