Tableau information
Concept source: d1j3bb2 amino acid (a.a.) range (LYS13)(PRO48)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS13) (ASN18) E1
(SER21) (GLY32) H2
(GLU33) (HIS38) E3
(LEU42) (PRO48) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -143.3° H2
E3 36.5° -115.5° E3
E4 -119.7° 55.3° 133.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3n0sa_ : (ASP166) (ASP218) [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
d3c9xa_ : (SER282) (GLN325) [view usage] : b.50.1.0 |Acid proteases |Acid proteases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
d2do8a1 : (GLN68) (SER109) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypothetical protein HD1794 |Haemophilus ducreyi [TaxId: 730]
d2rmpa_ : (GLU314) (PRO353) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Rhizomucor miehei [TaxId: 4839]
d1mnza_ : (ARG10) (PRO36) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1j3bb2 : (LYS13) (PRO48) [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Thermus thermophilus [TaxId: 274]
d1za4a1 : (SER11) (ARG42) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Thrombospondin 1 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1ce7a_ : (ASP5) (SER41) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d1pc8a_ : (GLU2) (ARG41) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d2mlla_ : (ASP5) (SER41) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d1y8ba_ : (ILE265) (LYS312) [view usage] : c.1.13.1 |TIM beta/alpha-barrel |Malate synthase G |Malate synthase G |Malate synthase G |Escherichia coli [TaxId: 562]
d1oqla_ : (LEU4) (ARG41) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d2xisa_ : (ASP9) (PRO36) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1xica_ : (ASP9) (PRO36) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1ii2a2 : (THR4) (ALA39) [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Trypanosoma cruzi [TaxId: 5693]
d1xkvb2 : (LYS13) (PRO48) [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Thermus thermophilus [TaxId: 274]
d3szya_ : (ARG58) (ASN103) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3t02a_ : (ARG58) (ASN103) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1khea2 : (HIS42) (THR80) [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Human (Homo sapiens) [TaxId: 9606]
d1bxna1 : (MET328) (SER372) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Alcaligenes eutrophus [TaxId: 106590]
d2keqa_ : (GLY-1) (GLN46) [view usage] : b.86.1.0 |Hedgehog/intein (Hint) domain |Hedgehog/intein (Hint) domain |automated matches |automated matches |Nostoc punctiforme [TaxId: 63737]
d2b3wa1 : (ILE16) (THR46) [view usage] : d.336.1.1 |YbiA-like |YbiA-like |YbiA-like |Hypothetical protein YbiA |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.76, b.29, c.140, d.165, b.50, c.109, d.310, b.86, d.336