Tableau information
Concept source: d4bj3a_ amino acid (a.a.) range (LEU143)(PHE195)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU143) (ASN154) E1
(TRP159) (GLY172) H2
(LYS179) (TYR187) E3
(ASN190) (PHE195) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -173.2° H2
E3 -18.8° 167.4° E3
E4 134.8° -38.7° 149.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nw0a_ : (ILE4) (VAL40) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Unidentified phage [TaxId: 38018]
d4f8ea1 : (PRO2) (ILE44) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1q9ya2 : (PHE437) (TYR467) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d4e4ga_ : (ASN409) (PRO442) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3dahc1 : (LEU7) (GLU49) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d4qiie_ : (ALA46) (PHE101) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2dtuc2 : (PHE434) (TYR464) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2cq3a1 : (LYS121) (PHE162) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 9 |Human (Homo sapiens) [TaxId: 9606]
d3dmpa_ : (LYS77) (PRO124) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1bd3a_ : (LYS104) (LEU151) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Uracil PRTase, Upp |Toxoplasma gondii [TaxId: 5811]
d1sbqa_ : (ALA47) (ASP88) [view usage] : c.124.1.6 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |Methenyltetrahydrofolate synthetase |5,10-methenyltetrahydrofolate synthetase homolog MPN348 |Mycoplasma pneumoniae [TaxId: 2104]
d2h07a1 : (ASN3) (ILE44) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4etna_ : (MET1) (ASN44) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1atzb_ : (ASP928) (VAL980) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d3wcqa_ : (GLY55) (SER84) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |automated matches |Cyanidioschyzon merolae [TaxId: 45157]
d2fk6a1 : (LYS263) (ARG306) [view usage] : d.157.1.7 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |RNase Z-like |Ribonuclease Z (RNase Z) |Bacillus subtilis [TaxId: 1423]
d2yzma1 : (MET1) (GLY46) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3bbla_ : (SER297) (SER338) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Chloroflexus aggregans [TaxId: 326427]
d3i12d1 : (LEU4) (VAL51) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d1ehib1 : (LYS404) (ASP452) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-alanine:D-lactate ligase VanA, N-domain |Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]
d1ghta_ : (ARG2) (LYS46) [view usage] : c.53.1.1 |Resolvase-like |Resolvase-like |gamma,delta resolvase, catalytic domain |gamma,delta resolvase, catalytic domain |Escherichia coli [TaxId: 562]
d4kk3a_ : (MSE1) (ASN44) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d2i80a1 : (GLU4) (ASN53) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d3hmca_ : (SER2) (LEU43) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1l7ra2 : (ASP277) (THR349) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |Bacterial cocaine esterase N-terminal domain |Rhodococcus sp. mb1 [TaxId: 51612]
d3kd6a_ : (GLY48) (TYR89) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d2ixva2 : (ASP6) (ASN43) [view usage] : c.1.8.8 |TIM beta/alpha-barrel |(Trans)glycosidases |1,4-beta-N-acetylmuraminidase |automated matches |Streptococcus phage [TaxId: 10747]
d3op8a_ : (GLY243) (CYS296) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |beta2-glycoprotein I |Human (Homo sapiens) [TaxId: 9606]
d2ejja_ : (LYS132) (ALA178) [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
d1v6za1 : (HIS4) (LEU45) [view usage] : b.122.1.2 |PUA domain-like |PUA domain-like |YggJ N-terminal domain-like |Hypothetical protein TTHA0657 (TT1575) |Thermus thermophilus [TaxId: 274]
d1z5gd_ : (SER109) (LYS154) [view usage] : c.108.1.12 |HAD-like |HAD-like |Class B acid phosphatase, AphA |Class B acid phosphatase, AphA |Salmonella typhimurium [TaxId: 90371]
d2izpa_ : (LEU1198) (ASP1233) [view usage] : a.250.1.1 |IpaD-like |IpaD-like |IpaD-like |Putative membrane antigen BipD |Burkholderia pseudomallei [TaxId: 28450]
d1fe8a_ : (ASP928) (VAL980) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d2dy4c2 : (PHE434) (TYR464) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d1ehia1 : (LYS4) (ASP52) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-alanine:D-lactate ligase VanA, N-domain |Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]
d2yzga1 : (MSE1) (GLY46) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1h09a2 : (ASP6) (CYS45) [view usage] : c.1.8.8 |TIM beta/alpha-barrel |(Trans)glycosidases |1,4-beta-N-acetylmuraminidase |N-terminal domain of endolysin |Bacteriophage cp-1 [TaxId: 10747]
d2z0ya1 : (ARG5) (LEU45) [view usage] : b.122.1.2 |PUA domain-like |PUA domain-like |YggJ N-terminal domain-like |Hypothetical protein TTHA0657 (TT1575) |Thermus thermophilus [TaxId: 274]
d1fe8c_ : (ASP928) (VAL980) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d1obaa2 : (ASP6) (CYS45) [view usage] : c.1.8.8 |TIM beta/alpha-barrel |(Trans)glycosidases |1,4-beta-N-acetylmuraminidase |N-terminal domain of endolysin |Bacteriophage cp-1 [TaxId: 10747]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.69, d.58, c.108, c.90, c.82, d.157, c.124, c.93, c.14, c.72, c.62, b.122, c.53, c.61, c.30, d.15, c.44, g.18,
a.250