Tableau information
Concept source: d1l7ha_ amino acid (a.a.) range (ALA420)(ASP460)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA420) (GLY429) E1
(GLY429) (ASP434) H2
(TRP438) (SER448) E3
(GLY454) (ASP460) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -46.9° H2
E3 159.1° 114.4° E3
E4 -39.2° -84.7° 160.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3eaea_ : (PRO22) (PHE52) [view usage] : b.34.9.2 |SH3-like barrel |Tudor/PWWP/MBT |PWWP domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f35a_ : (GLN9) (ASP73) [view usage] : b.94.1.1 |Olfactory marker protein |Olfactory marker protein |Olfactory marker protein |Olfactory marker protein |Mouse (Mus musculus) [TaxId: 10090]
d1a66a_ : (CYS120) (CYS174) [view usage] : b.2.5.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |Rel/Dorsal transcription factors, DNA-binding domain |T-cell transcription factor NFAT1 (NFATC), DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d1shwa_ : (ASP34) (CYS66) [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |Ephrin-a5 |Mouse (Mus musculus) [TaxId: 10090]
d3heib_ : (ASP19) (CYS51) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1v0za_ : (ASN427) (ASP468) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d2dy0b_ : (ILE155) (PRO181) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3b9kc2 : (ALA109) (LYS149) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Rat (Rattus rattus) [TaxId: 10117]
d3vb9a_ : (GLN87) (PRO127) [view usage] : e.65.1.1 |VPA0735-like |VPA0735-like |VPA0735-like |Hypothetical protein VPA0735 |Vibrio parahaemolyticus [TaxId: 670]
d1dt2a_ : (TYR150) (GLY179) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Exfoliative toxin B |Staphylococcus aureus [TaxId: 1280]
d1joba_ : (GLN109) (HIS167) [view usage] : b.94.1.1 |Olfactory marker protein |Olfactory marker protein |Olfactory marker protein |Olfactory marker protein |Mouse (Mus musculus) [TaxId: 10090]
d1nike_ : (PRO176) (CYS214) [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |Complete 12-subunit RNA polymerase II complex |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1mcww2 : (PRO117) (LYS153) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
d4mjua_ : (TYR406) (GLY448) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza a virus [TaxId: 385580]
d1inya_ : (ARG420) (ASP461) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d1lcsa_ : (ASN161) (MET204) [view usage] : b.20.1.1 |ENV polyprotein, receptor-binding domain |ENV polyprotein, receptor-binding domain |ENV polyprotein, receptor-binding domain |FLV receptor-binding domain |Feline leukemia virus, strain b/lambda-b1 [TaxId: 11768]
d3vvwb_ : (GLU83) (GLY126) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4et7a_ : (ILE126) (ALA179) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d5nn9a_ : (ARG419) (ASP460) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d1js8a2 : (PHE2844) (ALA2892) [view usage] : b.112.1.1 |C-terminal domain of mollusc hemocyanin |C-terminal domain of mollusc hemocyanin |C-terminal domain of mollusc hemocyanin |C-terminal domain of mollusc hemocyanin |Giant octopus (Octopus dofleini) [TaxId: 267067]
d4m4rd_ : (ALA29) (CYS62) [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4m4rb_ : (ALA29) (GLU66) [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4nn9a_ : (ARG419) (ASP460) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d3nn9a_ : (ARG419) (ASP460) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d3b1cd_ : (LEU144) (GLU178) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus anginosus [TaxId: 1328]
d1zluk2 : (SER114) (PRO141) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mcol2 : (THR120) (TRP152) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
d1ucga_ : (SER3) (ASN47) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease MC1 |Bitter gourd (Momordica charantia) [TaxId: 3673]
d1a14n_ : (ALA420) (ASP460) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d1tg7a4 : (ALA442) (ASP479) [view usage] : b.71.1.5 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Beta-galactosidase LacA, domain 2 |Beta-galactosidase LacA, domain 2 |Penicillium sp. [TaxId: 5081]
d4l0pb_ : (ASP29) (CYS61) [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b1ca_ : (LEU144) (GLU178) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus anginosus [TaxId: 1328]
d3b1cb_ : (LEU144) (ARG179) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus anginosus [TaxId: 1328]
d3vb9b_ : (GLN87) (PRO127) [view usage] : e.65.1.1 |VPA0735-like |VPA0735-like |VPA0735-like |Hypothetical protein VPA0735 |Vibrio parahaemolyticus [TaxId: 670]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, c.67, b.47, b.18, b.2, b.6, b.1, d.124, c.61, b.34, d.15, i.8, b.71, e.65, b.20, b.94, b.112