Tableau information
Concept source: d3kaab_ amino acid (a.a.) range (GLY73)(ALA113)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY73) (ILE79) E1
(THR83) (THR89) H2
(THR89) (GLN95) E3
(LYS104) (ALA113) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -142.8° H2
E3 153.5° 57.9° E3
E4 -23.3° -145.2° 154.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fcga1 : (PRO55) (PHE88) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), IIa [TaxId: 9606]
d4e5ga_ : (ARG75) (THR123) [view usage] : c.52.1.34 |Restriction endonuclease-like |Restriction endonuclease-like |PA N-terminal domain |PA N-terminal domain |Influenza A virus [TaxId: 93838]
d1j86a1 : (SER51) (VAL83) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |IgE high affinity receptor alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d1e4ja1 : (SER51) (ILE85) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), III [TaxId: 9606]
d3sgjc1 : (SER54) (VAL86) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2rf0d_ : (ARG42) (ASN74) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2p49b_ : (ASN77) (SER121) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
d1kgye_ : (PRO1035) (SER1070) [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |Ephrin-b2 ectodomain |Mouse (Mus musculus) [TaxId: 10090]
d1h9va1 : (PRO52) (SER85) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), IIa [TaxId: 9606]
d2v2ha_ : (GLN5) (THR44) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d2fcba1 : (PRO57) (SER90) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), IIb [TaxId: 9606]
d1b0pa2 : (MET832) (SER867) [view usage] : c.36.1.12 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |PFOR PP module |Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI |Desulfovibrio africanus [TaxId: 873]
d1cs6a3 : (PRO263) (ALA299) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Axonin-1 |Chicken (Gallus gallus) [TaxId: 9031]
d1t83c1 : (SER54) (VAL86) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), III [TaxId: 9606]
d1foaa_ : (VAL386) (PRO435) [view usage] : c.68.1.10 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |N-acetylglucosaminyltransferase I |N-acetylglucosaminyltransferase I |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1ajea_ : (ALA-1) (THR58) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
d1f6aa1 : (SER51) (VAL83) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |IgE high affinity receptor alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d3qbka_ : (SER92) (GLY116) [view usage] : f.13.1.0 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |automated matches |automated matches |Natronomonas pharaonis [TaxId: 2257]
d1biha3 : (LYS270) (VAL306) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Hemolin |Moth (Hyalophora cecropia) [TaxId: 7123]
d2lcfa_ : (MET1) (ASP57) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2frpa1 : (SER273) (LYS317) [view usage] : d.183.1.1 |Major capsid protein gp5 |Major capsid protein gp5 |Major capsid protein gp5 |Major capsid protein gp5 |Bacteriophage HK97 [TaxId: 37554]
d1u5dd_ : (GLY159) (THR191) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Src kinase-associated phosphoprotein SKAP55 (SCAP1) |Human (Homo sapiens) [TaxId: 9606]
d1wway_ : (LEU346) (MET379) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |High affinity nerve growth factor receptor TrkA, different domains |Human (Homo sapiens) [TaxId: 9606]
d3a7ka_ : (SER92) (GLY116) [view usage] : f.13.1.0 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |automated matches |automated matches |Natronomonas pharaonis [TaxId: 348780]
d3r0qg_ : (ASP339) (GLU383) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1mnla_ : (GLY1) (TYR61) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d3llrd_ : (PRO33) (VAL64) [view usage] : b.34.9.0 |SH3-like barrel |Tudor/PWWP/MBT |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4hc1a1 : (GLY53) (TYR90) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nunb2 : (GLU323) (LEU358) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR2b [TaxId: 9606]
d2fcpa_ : (LYS620) (ASP674) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d1fi1a_ : (LYS622) (ALA678) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d1tg7a4 : (ALA399) (HIS435) [view usage] : b.71.1.5 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Beta-galactosidase LacA, domain 2 |Beta-galactosidase LacA, domain 2 |Penicillium sp. [TaxId: 5081]
d2ea3a_ : (VAL130) (SER152) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Cellulomonas bogoriensis [TaxId: 301388]
d1j88a1 : (SER51) (VAL83) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |IgE high affinity receptor alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d2iepa2 : (LEU175) (VAL208) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jmxa3 : (THR330) (TYR362) [view usage] : b.1.18.14 |Immunoglobulin-like beta-sandwich |E set domains |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Pseudomonas putida [TaxId: 303]
d1n26a1 : (ARG60) (VAL91) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Interleukin-6 receptor alpha chain, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1k8fa_ : (CYS416) (PRO442) [view usage] : b.80.5.1 |Single-stranded right-handed beta-helix |C-terminal domain of adenylylcyclase associated protein |C-terminal domain of adenylylcyclase associated protein |C-terminal domain of adenylylcyclase associated protein |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.1, c.68, b.47, c.66, f.4, c.37, c.36, b.6, b.1, d.17, b.55, c.52, b.34, f.13, b.71, d.183