Tableau information
Concept source: d2j0tb_ amino acid (a.a.) range (LEU114)(PHE163)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU114) (ASN120) E1
(PRO126) (THR145) H2
(PRO146) (LYS151) E3
(ASP158) (PHE163) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 159.6° H2
E3 -29.0° 166.7° E3
E4 -24.0° 140.8° -51.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ayxa2 : (LYS707) (ASP750) [view usage] : c.23.1.6 |Flavodoxin-like |CheY-like |RcsC linker domain-like |Sensor kinase protein RcsC |Escherichia coli [TaxId: 562]
d3u7ra_ : (ALA108) (GLN146) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Paracoccus denitrificans [TaxId: 318586]
d1hska1 : (ASP50) (LEU99) [view usage] : d.145.1.2 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain |Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d3edha_ : (PRO16) (TYR59) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jdya_ : (PRO82) (ALA134) [view usage] : c.1.2.6 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |PdxS-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1af0a2 : (GLN54) (GLN122) [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d1vqwa2 : (SER214) (PRO258) [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Flavin-dependent monoxygenase SPBP16F5.08c |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1vkra_ : (ARG378) (THR429) [view usage] : c.44.2.1 |Phosphotyrosine protein phosphatases I-like |PTS system IIB component-like |PTS system, Lactose/Cellobiose specific IIB subunit |PTS system mannitol-specific EIICBA component |Escherichia coli [TaxId: 562]
d1b3db_ : (LEU97) (ARG149) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
d1smpa2 : (GLN54) (GLN122) [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d1jr6a_ : (HIS38) (ALA84) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d4gbpa_ : (ASN113) (GLU174) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1os2a_ : (ILE114) (PHE163) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
d1w94a1 : (VAL91) (THR124) [view usage] : c.51.1.2 |Anticodon-binding domain-like |Class II aaRS ABD-related |Brix domain |Probable ribosomal biogenesis protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d4h49c_ : (ILE114) (PHE163) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fp4b_ : (PHE367) (ASN397) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Azotobacter vinelandii [TaxId: 354]
d4h2ea_ : (HIS119) (ALA173) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Gelatinase B (MMP-9) |Human (Homo sapiens) [TaxId: 9606]
d1xhja_ : (LYS41) (HIS85) [view usage] : d.52.8.1 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |NifU C-terminal domain-like |Nitrogen fixation protein NifU homolog SE0630 |Staphylococcus epidermidis [TaxId: 1282]
d3hjha2 : (PRO384) (GLY428) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1bqqm_ : (ILE124) (PHE181) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Membrane-type matrix metalloproteinase (CDMT1-MMP) |Human (Homo sapiens) [TaxId: 9606]
d3dt6a_ : (LYS95) (GLN143) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |automated matches |Cow (Bos taurus) [TaxId: 9913]
d456ca_ : (LEU118) (PHE167) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
d1jiza_ : (ILE15) (PHE64) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
d1diia2 : (ALA60) (LEU110) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Flavoprotein subunit of p-cresol methylhydroxylase |Pseudomonas putida [TaxId: 303]
d2vhea_ : (GLU5) (ILE55) [view usage] : b.81.1.8 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |PglD-like |Acetyltransferase PglD |Campylobacter jejuni [TaxId: 197]
d3bvpa_ : (LYS3) (ALA48) [view usage] : c.53.1.0 |Resolvase-like |Resolvase-like |automated matches |automated matches |Lactococcus phage [TaxId: 35345]
d3fdsa2 : (ILE245) (THR290) [view usage] : d.240.1.1 |Lesion bypass DNA polymerase (Y-family), little finger domain |Lesion bypass DNA polymerase (Y-family), little finger domain |Lesion bypass DNA polymerase (Y-family), little finger domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.81, c.68, c.92, d.92, c.23, c.37, c.53, c.51, d.145, c.3, c.44, d.240, d.52