Protein Concepts Dictionary

Tableau information

Concept source:  d3slhc_  amino acid (a.a.) range (GLY36)(GLU75)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY36)   (GLY42) E1
	   (GLY46)   (GLY60) H2
	   (SER62)   (ILE66) E3
	   (ASN70)   (GLU75) E4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
H2     -164.5°   H2                   
E3      -28.8° -147.8°   E3            
E4      174.6°   16.1°  156.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2yvwa_ :   (GLY114)  (LYS157)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d3ti2a_ :   (LYS187)  (PRO227)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 243277]
 d4r7uc_ :    (GLU38)   (ALA75)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d1s2oa1 :   (TRP115)  (LEU156)   [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Sucrose-phosphatase Slr0953 |Synechocystis sp. PCC 6803 [TaxId: 1148]
 d1nawa_ :   (GLY105)  (ASN148)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Enterobacter cloacae [TaxId: 550]
 d1fsaa_ :   (GLY259)  (SER320)   [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
 d3nvsa_ :   (LYS187)  (ILE226)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 666]
 d3nvsa_ :   (GLY259)  (ARG299)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 666]
 d3rmtc_ :   (THR188)  (GLU221)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3vcya_ :    (GLU38)   (ALA75)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio fischeri [TaxId: 388396]
 d1kqfb1 :    (GLU29)   (LYS97)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Formate dehydrogenase N, iron-sulfur (beta) subunit |Escherichia coli [TaxId: 562]
 d2wefa_ :   (SER234)  (ARG289)   [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xxfc_ :    (LYS95)  (LYS135)   [view usage] : b.16.1.1 |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Escherichia coli [TaxId: 562]
 d3ti2b_ :   (LYS187)  (ILE226)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 243277]
 d3ti2d_ :   (LYS187)  (PRO227)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 243277]
 d1skub1 :    (GLY15)   (GLU62)   [view usage] : d.58.2.1 |Ferredoxin-like |Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |Aspartate carbamoyltransferase |Escherichia coli [TaxId: 562]
 d1nvmb2 :   (MET207)  (GLY279)   [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Acetaldehyde dehydrogenase (acylating) |Pseudomonas sp. [TaxId: 306]
 d3ti2c_ :   (LYS187)  (PRO227)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 243277]
 d1h0hb_ :     (SER1)   (PRO69)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Tungsten containing formate dehydrogenase, small subunit |Desulfovibrio gigas [TaxId: 879]
 d1gt8a5 :   (GLU942)  (ASP984)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Dihydropyrimidine dehydrogenase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1ti2b2 :     (GLN3)   (CYS68)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Transhydroxylase beta subunit, BthL, N-terminal domain |Pelobacter acidigallici [TaxId: 35816]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.68,    d.58,   c.108,    d.81,     e.7,    b.16