Tableau information
Concept source: d3ne6a2 amino acid (a.a.) range (TYR831)(LYS888)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR831) (GLU837) E1
(LYS844) (PRO849) E2
(THR855) (TRP865) H3
(ASP867) (LYS888) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 158.3° E2
H3 54.0° -141.9° H3
H4 111.0° -89.5° -59.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2cyba_ : (GLY264) (GLY320) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3suna2 : (TYR831) (LYS888) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2xsnb_ : (SER487) (GLY528) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2k5wa1 : (ALA66) (PHE106) [view usage] : b.40.13.1 |OB-fold |BC4932-like |BC4932-like |Uncharacterized protein BC2438 |Bacillus cereus [TaxId: 1396]
d3cfoa2 : (TYR831) (LYS888) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d1u67a1 : (SER394) (GLN429) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Sheep (Ovis aries) [TaxId: 9940]
d1diya1 : (SER394) (GLN429) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Sheep (Ovis aries) [TaxId: 9940]
d2dtud2 : (GLY827) (LYS888) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d3rmca2 : (GLU828) (LYS888) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d1clha_ : (PRO5) (THR44) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidyl-prolyl cis-trans isomerase A, PpiA |Escherichia coli [TaxId: 562]
d3vyqa_ : (LYS92) (ASN129) [view usage] : d.10.1.0 |DNA-binding domain |DNA-binding domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3suoa2 : (TYR831) (LYS888) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2qqsb1 : (GLU925) (GLY955) [view usage] : b.34.9.1 |SH3-like barrel |Tudor/PWWP/MBT |Tudor domain |Jumonji domain-containing protein 2A |Human (Homo sapiens) [TaxId: 9606]
d3rmbc2 : (TYR831) (LYS888) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2dy4d2 : (GLU828) (ALA887) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d3j39f_ : (GLY161) (HIS186) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d4r3fa_ : (GLY13) (GLY47) [view usage] : b.62.1.0 |Cyclophilin-like |Cyclophilin-like |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d1xtfa_ : (ARG241) (ILE274) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
d1j2qh_ : (ILE173) (ARG197) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Archaeoglobus fulgidus [TaxId: 2234]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, i.1, c.26, d.92, a.93, b.40, d.178, d.153, b.62, b.34, d.10