Tableau information
Concept source: d1ypof_ amino acid (a.a.) range (ASP147)(SER196)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP147) (GLY152) E1
(CYS155) (GLY161) E2
(ASN164) (ASP176) H3
(THR185) (SER196) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 146.1° E2
H3 -79.3° 134.4° H3
H4 148.5° -45.0° 102.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1rmda2 : (ASP35) (LEU84) [view usage] : g.44.1.1 |RING/U-box |RING/U-box |RING finger domain, C3HC4 |V(D)J recombination activating protein 1 (RAG1), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
d1v7pa_ : (ASP7) (VAL57) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin alpha chain |Snake (Echis multisquamatus), Ems16 [TaxId: 93050]
d2c2vv_ : (ARG242) (ASN298) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1xoxa_ : (ASP53) (THR117) [view usage] : g.52.1.1 |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |Anti-apoptotic protein survivin |Human (Homo sapiens) [TaxId: 9606]
d4pp8a_ : (TRP119) (VAL165) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell-activating receptor nkg2d |Mouse (Mus musculus) [TaxId: 10090]
d3c8jd_ : (GLY139) (HIS189) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1umra_ : (ASP7) (ASN60) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin alpha chain |South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]
d1v7pb_ : (GLY4) (ALA57) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin beta chain |Snake (Echis multisquamatus), Ems16 [TaxId: 93050]
d1mpua_ : (TRP103) (VAL149) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell-activating receptor nkg2d |Human (Homo sapiens) [TaxId: 9606]
d1e31a_ : (ASP53) (ALA140) [view usage] : g.52.1.1 |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |Anti-apoptotic protein survivin |Human (Homo sapiens) [TaxId: 9606]
d1jm7a_ : (LYS32) (ASP96) [view usage] : g.44.1.1 |RING/U-box |RING/U-box |RING finger domain, C3HC4 |brca1 RING domain |Human (Homo sapiens) [TaxId: 9606]
d2c6ua_ : (ASN105) (ARG152) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gk1f_ : (LYS166) (HIS213) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dl6a1 : (THR18) (GLN68) [view usage] : d.76.2.1 |GYF/BRK domain-like |BRK domain-like |BRK domain-like |Chromodomain-helicase-dna-binding protein 8, CHD8 |Human (Homo sapiens) [TaxId: 9606]
d1ukmb_ : (GLY4) (ALA57) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin beta chain |Snake (Echis multisquamatus), Ems16 [TaxId: 93050]
d1u0nc_ : (ASP2005) (SER2056) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin beta chain |Jararaca (Bothrops jararaca), botrocetin [TaxId: 8724]
d1ii2a2 : (GLU89) (THR135) [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Trypanosoma cruzi [TaxId: 5693]
d1p4ld_ : (VAL140) (VAL190) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell receptor |Mouse (Mus musculus), ly49-c [TaxId: 10090]
d3c8jb_ : (GLY139) (HIS189) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2fafa1 : (PRO158) (LEU204) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3c8ja_ : (THR136) (HIS189) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1hyrb_ : (TRP103) (VAL149) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell-activating receptor nkg2d |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.169, c.109, g.52, g.44, d.76