Tableau information
Concept source: d1mzaa_ amino acid (a.a.) range (THR134)(PHE175)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR134) (GLY140) E1
(THR154) (SER164) E2
(SER164) (SER170) H3
(TYR172) (PHE175) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 148.2° E2
H3 -61.4° 96.0° H3
H4 65.4° -106.4° 108.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4nf8b_ : (VAL132) (SER161) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1orfa_ : (THR134) (VAL175) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Granzyme A |Human (Homo sapiens) [TaxId: 9606]
d2ii1b_ : (PRO217) (GLY266) [view usage] : b.23.3.0 |CUB-like |Acetamidase/Formamidase-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d1yv2a_ : (GLN441) (LEU474) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d3u95a2 : (ASP202) (PHE259) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |automated matches |Thermotoga neapolitana [TaxId: 309803]
d1iu3c_ : (THR70) (ILE116) [view usage] : d.228.1.1 |Replication modulator SeqA, C-terminal DNA-binding domain |Replication modulator SeqA, C-terminal DNA-binding domain |Replication modulator SeqA, C-terminal DNA-binding domain |Replication modulator SeqA, C-terminal DNA-binding domain |Escherichia coli [TaxId: 562]
d1dt1a_ : (GLN57) (LYS98) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Thermus thermophilus [TaxId: 274]
d4il8a3 : (LEU321) (SER365) [view usage] : c.84.1.0 |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1k35a3 : (LEU321) (SER365) [view usage] : c.84.1.1 |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Phosphomannomutase/phosphoglucomutase |Pseudomonas aeruginosa [TaxId: 287]
d2ii1a_ : (PRO217) (GLY268) [view usage] : b.23.3.0 |CUB-like |Acetamidase/Formamidase-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d2wnha_ : (ARG190) (ALA228) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1vi5c_ : (ASN147) (GLU194) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d2ii1d_ : (PRO217) (GLY268) [view usage] : b.23.3.0 |CUB-like |Acetamidase/Formamidase-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d4dvau_ : (THR134) (VAL176) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Urokinase-type plasminogen activator (LMW U-PA), catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1x3la_ : (GLU359) (HIS403) [view usage] : c.118.1.0 |GckA/TtuD-like |GckA/TtuD-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1sgta_ : (GLY134) (GLU180) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Trypsin |Streptomyces griseus, strain k1 [TaxId: 1911]
d1vi5d_ : (ASN147) (GLU194) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d3u95b2 : (ASP202) (PHE259) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |automated matches |Thermotoga neapolitana [TaxId: 309803]
d1mzaa_ : (THR134) (PHE175) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Granzyme K |Human (Homo sapiens) [TaxId: 9606]
d2jkva2 : (LYS303) (MET361) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fona_ : (ALA125) (VAL168) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Procarboxypeptidase A-S6 subunit III (zymogen E) |Cow (Bos taurus) [TaxId: 9913]
d2ii1c_ : (PRO217) (GLY268) [view usage] : b.23.3.0 |CUB-like |Acetamidase/Formamidase-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d1w26a2 : (GLN2) (ARG57) [view usage] : d.241.2.1 |Ribosome binding domain-like |Trigger factor ribosome-binding domain |Trigger factor ribosome-binding domain |Trigger factor ribosome-binding domain |Escherichia coli [TaxId: 562]
d3a2fa1 : (GLU72) (GLY125) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d4o98a_ : (GLY36) (PHE78) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas oleovorans [TaxId: 301]
d2w8na_ : (ASN367) (GLY403) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3h7ta_ : (THR118) (TYR166) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Sarcoptes scabiei [TaxId: 197185]
d1cgie_ : (THR134) (MET180) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |(alpha,gamma)-chymotrypsin(ogen) |Cow (Bos taurus) [TaxId: 9913]
d1elta_ : (PRO135) (VAL176) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Atlantic salmon (Salmo salar) [TaxId: 8030]
d1rl3b2 : (THR736) (ASN767) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Regulatory subunit of Protein kinase A |Cow (Bos taurus) [TaxId: 9913]
d3uknb_ : (ALA698) (LEU738) [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1haxb_ : (PRO135) (VAL176) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Pig (Sus scrofa) [TaxId: 9823]
d1mfqb_ : (ASN59) (GLN120) [view usage] : d.201.1.1 |SRP19 |SRP19 |SRP19 |SRP19 |Human (Homo sapiens) [TaxId: 9606]
d2jkvf2 : (LYS303) (MET361) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4nhda2 : (SER190) (ASP238) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d2ju3a_ : (GLY5) (GLY32) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2f91a1 : (GLY134) (LEU177) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]
d2bfga2 : (ASP111) (THR152) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-D-xylosidase, catalytic domain |Bacillus stearothermophilus [TaxId: 1422]
d3gg5d_ : (GLY60) (LYS104) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1k2yx3 : (LEU321) (SER365) [view usage] : c.84.1.1 |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Phosphomannomutase/phosphoglucomutase |Pseudomonas aeruginosa [TaxId: 287]
d1qyza_ : (GLN57) (VAL97) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Thermus thermophilus [TaxId: 274]
d1op8a_ : (THR134) (VAL175) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Granzyme A |Human (Homo sapiens) [TaxId: 9606]
d2wnhb_ : (ARG190) (ALA228) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d4o98b_ : (GLY36) (PHE78) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas oleovorans [TaxId: 301]
d2qo5a_ : (GLY4) (LYS32) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1owda_ : (THR132) (VAL176) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Urokinase-type plasminogen activator (LMW U-PA), catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1re5d_ : (VAL149) (LEU188) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |3-carboxy-cis,cis-muconate cycloisomerase (CMLE) |Pseudomonas putida, strain KT2440 [TaxId: 303]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, b.82, c.94, c.82, b.47, d.157, d.117, a.127, c.23, c.55, c.95, b.60, c.60, a.100, d.162, a.3, b.23, c.84, c.118,
d.241, d.228, d.201