Protein Concepts Dictionary

Tableau information

Concept source:  d2b2ua1  amino acid (a.a.) range (ILE137)(ARG185)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE137)  (GLN142) E1
	  (GLY147)  (GLY157) E2
	  (ASP167)  (LYS173) H3
	  (PHE175)  (ARG185) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
E2      156.0°   E2                   
H3     -136.1°   59.9°   H3            
H4      -88.4°  103.1° -109.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2h12b_ :    (ILE64)  (GLY100)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Acetobacter aceti [TaxId: 435]
 d3qo2b_ :    (LEU65)  (ALA115)   [view usage] : b.34.13.0 |SH3-like barrel |Chromo domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2b2va1 :   (ILE137)  (SER184)   [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |ATP-dependent helicase CHD1 (Chromo domain protein 1) |Human (Homo sapiens) [TaxId: 9606]
 d1x3qa1 :    (VAL14)   (TYR57)   [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |CpSRP43 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3qo2c_ :    (LEU65)  (LYS114)   [view usage] : b.34.13.0 |SH3-like barrel |Chromo domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3r93a_ :    (ASP66)  (LYS114)   [view usage] : b.34.13.0 |SH3-like barrel |Chromo domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3h91a_ :    (LEU18)   (LYS60)   [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3lwea_ :    (ASP11)   (ALA60)   [view usage] : b.34.13.0 |SH3-like barrel |Chromo domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2b2ua1 :   (ILE137)  (ARG185)   [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |ATP-dependent helicase CHD1 (Chromo domain protein 1) |Human (Homo sapiens) [TaxId: 9606]
 d2b2ta2 :   (ILE137)  (SER184)   [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |ATP-dependent helicase CHD1 (Chromo domain protein 1) |Human (Homo sapiens) [TaxId: 9606]
 d3f2ua_ :    (ASP10)   (GLN51)   [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |Heterochromatin protein 1, HP1 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.103,    b.34