Tableau information
Concept source: d1sija4 amino acid (a.a.) range (PRO370)(GLY404)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO370) (MET377) E1
(CYS383) (SER387) E2
(VAL392) (MET398) H3
(ILE399) (GLY404) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 164.9° E2
H3 -67.6° 127.2° H3
H4 -51.5° 136.8° -38.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4db3a2 : (PRO123) (GLY203) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Vibrio vulnificus [TaxId: 672]
d2hxsa_ : (PHE50) (ILE83) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fgea3 : (GLY351) (GLY391) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Presequence protease 1, PREP1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2wbma1 : (ALA10) (LEU44) [view usage] : d.235.1.0 |FYSH domain |FYSH domain |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d1yu1a2 : (GLY181) (HIS247) [view usage] : d.169.1.8 |C-type lectin-like |C-type lectin-like |Mtd variable domain |Major tropism determinant (Mtd), C-terminal domain |Bordetella phage bpp-1 [TaxId: 194699]
d3liea2 : (ASN207) (TYR251) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |GGDEF family protein VP0354 |Vibrio parahaemolyticus [TaxId: 670]
d1yu3a2 : (GLY181) (HIS247) [view usage] : d.169.1.8 |C-type lectin-like |C-type lectin-like |Mtd variable domain |Major tropism determinant (Mtd), C-terminal domain |Bordetella phage bpp-1 [TaxId: 194699]
d1yu2a2 : (GLY181) (GLY249) [view usage] : d.169.1.8 |C-type lectin-like |C-type lectin-like |Mtd variable domain |Major tropism determinant (Mtd), C-terminal domain |Bordetella phage bpp-1 [TaxId: 194699]
d3fd4b_ : (THR108) (GLU134) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human herpesvirus 4 (strain b95-8) [TaxId: 10377]
d4riwd_ : (THR701) (SER744) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |EGF receptor tyrosine kinase, Erbb-1 |Human (Homo sapiens) [TaxId: 9606]
d3logb_ : (VAL254) (THR310) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d1ahja_ : (GLU157) (GLY198) [view usage] : d.149.1.1 |Nitrile hydratase alpha chain |Nitrile hydratase alpha chain |Nitrile hydratase alpha chain |Iron-containing nitrile hydratase |Rhodococcus erythropolis [TaxId: 1833]
d1ugsa_ : (GLU156) (GLY197) [view usage] : d.149.1.1 |Nitrile hydratase alpha chain |Nitrile hydratase alpha chain |Nitrile hydratase alpha chain |Cobalt-containing nitrile hydratase |Pseudonocardia thermophila [TaxId: 1848]
d2euaa1 : (PRO239) (LEU296) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Menaquinone-specific isochorismate synthase MenF |Escherichia coli [TaxId: 562]
d1sija4 : (PRO370) (GLY404) [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Aldehyde oxidoreductase |Desulfovibrio gigas [TaxId: 879]
d3sxea_ : (VAL162) (GLU197) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1yu4a2 : (GLY181) (GLY249) [view usage] : d.169.1.8 |C-type lectin-like |C-type lectin-like |Mtd variable domain |Major tropism determinant (Mtd), C-terminal domain |Bordetella phage bpp-1 [TaxId: 194699]
d1v7lb_ : (MET1) (PRO43) [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Isopropylmalate isomerase LeuD |Pyrococcus horikoshii [TaxId: 53953]
d1rp5a3 : (GLN202) (GLY229) [view usage] : d.175.1.1 |Penicillin binding protein dimerisation domain |Penicillin binding protein dimerisation domain |Penicillin binding protein dimerisation domain |Penicillin-binding protein 2x (pbp-2x), N-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2d38a_ : (ASN33) (SER62) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1kg0c_ : (THR108) (GLU134) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |EBV gp42 |Epstein-Barr virus [TaxId: 10376]
d1yu0a2 : (GLY181) (HIS247) [view usage] : d.169.1.8 |C-type lectin-like |C-type lectin-like |Mtd variable domain |Major tropism determinant (Mtd), C-terminal domain |Bordetella phage bpp-1 [TaxId: 194699]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.68, d.144, c.37, d.185, c.55, d.169, b.45, d.133, d.110, c.8, d.175, d.149, d.161, d.235