Tableau information
Concept source: d1f9xa_ amino acid (a.a.) range (ASP296)(LYS334)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP296) (CYS300) E1
(GLY304) (ASP309) E2
(ASP315) (TYR324) H3
(LYS328) (LYS334) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 155.2° E2
H3 -48.9° 124.5° H3
H4 87.8° -77.1° -121.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3tuid1 : (CYS210) (PHE240) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1d6aa_ : (LYS225) (VAL249) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Pokeweed antiviral protein alpha |Pokeweed (Phytolacca americana) [TaxId: 3527]
d2d8qa1 : (SER26) (CYS54) [view usage] : g.85.1.1 |HIT/MYND zinc finger-like |HIT/MYND zinc finger-like |MYND zinc finger |Zinc finger MYND domain-containing protein 10, ZMYND10 |Human (Homo sapiens) [TaxId: 9606]
d1mt0a_ : (ARG672) (SER706) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Haemolysin B ATP-binding protein |Escherichia coli [TaxId: 562]
d1p98a_ : (VAL3) (GLN46) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like domain of Rad23 homolog A (Hhr23a) |Human (Homo sapiens) [TaxId: 9606]
d4fila_ : (THR179) (LEU219) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d3on6a_ : (THR87) (ASP146) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |automated matches |Bacteroides ovatus [TaxId: 411476]
d2i3ea_ : (THR95) (VAL143) [view usage] : d.61.1.0 |LigT-like |LigT-like |automated matches |automated matches |Carassius auratus [TaxId: 7957]
d1gpxa_ : (LYS2) (VAL36) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Pseudomonas putida, putidaredoxin [TaxId: 303]
d2g0ya_ : (GLY101) (ARG137) [view usage] : b.80.8.1 |Single-stranded right-handed beta-helix |Pentapeptide repeat-like |Pentapeptide repeats |Lumenal RFR-domain protein |Cyanothece sp. atcc 51142 [TaxId: 43989]
d3h5ka_ : (LYS224) (MET248) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Phytolacca dioica [TaxId: 29725]
d1apaa_ : (SER229) (VAL253) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Pokeweed antiviral protein alpha |Pokeweed (Phytolacca americana) [TaxId: 3527]
d2c5wb1 : (THR392) (GLY441) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 1a, transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2ixga_ : (HIS688) (LEU720) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1p1aa_ : (SER2) (GLY46) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like domain of Rad23 homolog B (Hhr23B) |Human (Homo sapiens) [TaxId: 9606]
d1mf8a_ : (LEU187) (TRP232) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Protein phosphatase-2B (PP-2B, calcineurin A subunit) |Human (Homo sapiens) [TaxId: 9606]
d4c3za_ : (VAL837) (ARG867) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ff7a_ : (ARG672) (SER706) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Haemolysin B ATP-binding protein |Escherichia coli [TaxId: 562]
d2v6ia2 : (LEU384) (GLY429) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Kokobera virus [TaxId: 44024]
d2jz3c_ : (MET17) (LEU46) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |Elongin C |Mouse (Mus musculus) [TaxId: 10090]
d2zc5b_ : (THR392) (GLY441) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2sici_ : (ASP76) (ALA112) [view usage] : d.84.1.1 |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Streptomyces albogriseolus, s-3253 [TaxId: 1887]
d2l5ua_ : (GLU22) (ALA45) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |Mi2-beta (CHD4) |Human (Homo sapiens) [TaxId: 9606]
d2ixea_ : (HIS688) (ALA719) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d5sici_ : (ASP76) (ALA112) [view usage] : d.84.1.1 |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Streptomyces lividans [TaxId: 1916]
d4p1ma_ : (VAL6) (ILE100) [view usage] : d.244.1.0 |Cell division protein ZapA-like |Cell division protein ZapA-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2ixfa_ : (HIS687) (ALA719) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2p0va1 : (THR87) (ASP146) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein BT3781 |Bacteroides thetaiotaomicron [TaxId: 818]
d1jj7a_ : (HIS711) (ALA742) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Peptide transporter Tap1, C-terminal ABC domain |Human (Homo sapiens) [TaxId: 9606]
d1cksb_ : (ILE6) (GLY47) [view usage] : d.97.1.1 |Cell cycle regulatory proteins |Cell cycle regulatory proteins |Cell cycle regulatory proteins |CksHs2 |Human (Homo sapiens) [TaxId: 9606]
d1kt1a3 : (ARG167) (MET209) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP51, N-terminal domains |Monkey (Saimiri boliviensis) [TaxId: 27679]
d1puta_ : (SER1) (VAL36) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Pseudomonas putida, putidaredoxin [TaxId: 303]
d2ixfc_ : (HIS688) (GLU718) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2cbza_ : (VAL837) (ARG867) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qz2a2 : (ILE169) (MET211) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP52, N-terminal domains |Human (Homo sapiens) [TaxId: 9606]
d1s3sg_ : (PRO294) (THR335) [view usage] : d.15.1.2 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |UBX domain |p47 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1diia2 : (CYS183) (THR224) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Flavoprotein subunit of p-cresol methylhydroxylase |Pseudomonas putida [TaxId: 303]
d3sici_ : (ASP76) (ALA112) [view usage] : d.84.1.1 |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Streptomyces lividans [TaxId: 1916]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, e.3, d.159, c.92, a.102, d.165, c.37, d.145, g.52, d.15, d.42, d.26, d.97, d.61, g.50, d.84, g.85, d.244