Tableau information
Concept source: d2xnac2 amino acid (a.a.) range (ARG108)(SER157)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG108) (ASP117) E1
(GLU124) (LYS130) E2
(THR134) (LYS151) H3
(TYR154) (SER157) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 152.7° E2
H3 -44.6° 152.8° H3
H4 59.6° -121.2° 85.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1nbwa3 : (LYS498) (ALA552) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |ATPase domain of the glycerol dehydratase reactivase alpha subunit |Klebsiella pneumoniae [TaxId: 573]
d1wc0a_ : (GLN1052) (GLU1110) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d3j39h_ : (GLY129) (LEU174) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d2xnac2 : (ARG108) (SER157) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Staphylococcal enterotoxin H, SEH |Staphylococcus aureus [TaxId: 1280]
d2d0oc3 : (VAL497) (PRO550) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |Diol dehydratase-reactivating factor large subunit DdrA |Klebsiella oxytoca [TaxId: 571]
d1wc4a_ : (GLN1052) (GLU1110) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d4stda_ : (LYS119) (THR168) [view usage] : d.17.4.1 |Cystatin-like |NTF2-like |Scytalone dehydratase |Scytalone dehydratase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d2haqa_ : (THR26) (GLY68) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Leishmania donovani [TaxId: 5661]
d1e44a_ : (GLY1) (ASN45) [view usage] : d.26.2.1 |FKBP-like |Colicin E3 immunity protein |Colicin E3 immunity protein |Colicin E3 immunity protein |Escherichia coli [TaxId: 562]
d1xc3a2 : (CYS123) (SER196) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Putative fructokinase YhdR |Bacillus subtilis [TaxId: 1423]
d2je6b2 : (GLU186) (VAL241) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Exosome complex exonuclease 1, ECX1 |Sulfolobus solfataricus [TaxId: 2287]
d2k1fa_ : (ILE13) (ARG54) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-1 (smt3 homologue) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2fexa1 : (ARG143) (ARG188) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |Hypothetical protein Atu0886 |Agrobacterium tumefaciens [TaxId: 358]
d2d0oa3 : (VAL497) (PRO550) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |Diol dehydratase-reactivating factor large subunit DdrA |Klebsiella oxytoca [TaxId: 571]
d3acla_ : (PRO249) (THR283) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wira_ : (ARG13) (GLY51) [view usage] : g.37.1.5 |beta-beta-alpha zinc fingers |beta-beta-alpha zinc fingers |variant C2H2 finger |Protein arginine N-methyltransferase 3 |Mouse (Mus musculus) [TaxId: 10090]
d1ua4a_ : (LYS337) (PRO391) [view usage] : c.72.1.3 |Ribokinase-like |Ribokinase-like |ADP-specific Phosphofructokinase/Glucokinase |ADP-dependent glucokinase |Pyrococcus furiosus [TaxId: 2261]
d1wgha_ : (ASP15) (ARG66) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like protein 3, Ubl3 |Mouse (Mus musculus) [TaxId: 10090]
d1at9a_ : (THR67) (MET118) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Bacteriorhodopsin |Halobacterium salinarum [TaxId: 2242]
d2jqgr_ : (MET29) (LEU89) [view usage] : d.3.1.2 |Cysteine proteinases |Cysteine proteinases |FMDV leader protease |automated matches |Foot-and-mouth disease virus (strain o1) [TaxId: 73482]
d1df3a_ : (ASN99) (ARG156) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Mouse (Mus musculus) [TaxId: 10090]
d1ibxa_ : (GLN3) (ARG45) [view usage] : d.15.2.1 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |CAD domain |Caspase-activated DNase (CAD), DFF40, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2nmla1 : (HIS3) (ASP63) [view usage] : d.330.1.1 |ERH-like |ERH-like |ERH-like |Enhancer of rudimentary homolog, ERH |Mouse (Mus musculus) [TaxId: 10090]
d2w8na_ : (GLY403) (THR439) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2k9ca_ : (ILE159) (GLN259) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
d1j1la_ : (PRO249) (THR283) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |Pirin |Human (Homo sapiens) [TaxId: 9606]
d3deda1 : (GLU342) (GLY378) [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Probable hemolysin CV0231 |Chromobacterium violaceum [TaxId: 536]
d1wz7a_ : (HIS3) (ASP63) [view usage] : d.330.1.1 |ERH-like |ERH-like |ERH-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2mlxa1 : (MET1) (GLY59) [view usage] : d.241.2.0 |Ribosome binding domain-like |Trigger factor ribosome-binding domain |automated matches |automated matches |Escherichia coli [TaxId: 1403831]
d4ubub2 : (ARG271) (ASP310) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2mjda_ : (LEU4) (HIS51) [view usage] : d.15.4.0 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2d0pc3 : (VAL497) (PRO550) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |Diol dehydratase-reactivating factor large subunit DdrA |Klebsiella oxytoca [TaxId: 571]
d1onib_ : (GLN23) (VAL77) [view usage] : d.79.1.1 |Bacillus chorismate mutase-like |YjgF-like |YjgF/L-PSP |14.5 kda translational inhibitor protein, L-PSP |Human (Homo sapiens) [TaxId: 9606]
d1kkmb_ : (SER229) (ASN308) [view usage] : c.91.1.2 |PEP carboxykinase-like |PEP carboxykinase-like |HPr kinase HprK C-terminal domain |HPr kinase HprK C-terminal domain |Lactobacillus casei [TaxId: 1582]
d3dedb_ : (GLU342) (GLY378) [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Probable hemolysin CV0231 |Chromobacterium violaceum [TaxId: 536]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, d.58, i.1, c.82, d.92, c.72, c.23, c.55, c.95, b.60, d.3, d.17, b.62, d.79, d.145, f.13, c.91, d.15, d.26, d.101,
g.37, d.241, d.330