Tableau information
Concept source: d1bw3a_ amino acid (a.a.) range (LYS65)(ASP103)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS65) (ASN71) E1
(GLY75) (ARG81) E2
(ASP94) (VAL98) H3
(VAL98) (ASP103) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 160.2° E2
H3 -66.4° 133.3° H3
H4 -25.1° 169.7° -43.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3f81a_ : (PRO29) (GLY55) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hj1b_ : (LEU10) (PHE51) [view usage] : d.15.3.4 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |HI0395-like |automated matches |Haemophilus influenzae [TaxId: 281310]
d2rcua1 : (ASP608) (GLY653) [view usage] : c.43.1.0 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4ilfa2 : (PRO183) (GLN212) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |automated matches |Salmonella typhimurium [TaxId: 99287]
d3j39h_ : (LEU43) (GLY85) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d1yhia_ : (PHE27) (PHE71) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
d3fz2c_ : (ALA41) (SER93) [view usage] : d.323.1.1 |Phage tail protein-like |Phage tail protein-like |Lambda phage gpU-like |automated matches |Enterobacteria phage [TaxId: 10710]
d1ci8a_ : (GLY353) (ALA391) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Esterase EstB |Burkholderia gladioli [TaxId: 28095]
d2g6zb_ : (GLY178) (HIS204) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wx9a1 : (LEU8) (SER42) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Large proline-rich protein BAT3 |Human (Homo sapiens) [TaxId: 9606]
d1aipc2 : (ILE59) (MET102) [view usage] : d.43.1.1 |EF-Ts domain-like |Elongation factor Ts (EF-Ts), dimerisation domain |Elongation factor Ts (EF-Ts), dimerisation domain |Elongation factor Ts (EF-Ts), dimerisation domain |Thermus thermophilus [TaxId: 274]
d4eewa_ : (ASP15) (SER51) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1i1qa_ : (ARG469) (HIS515) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Anthranilate synthase aminodeoxyisochorismate synthase/lyase subunit, TrpE |Salmonella typhimurium [TaxId: 90371]
d1efva2 : (GLY267) (LYS294) [view usage] : c.31.1.2 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |C-terminal domain of the electron transfer flavoprotein alpha subunit |C-terminal domain of the electron transfer flavoprotein alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d4nosa_ : (ILE265) (GLY294) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Human (Homo sapiens) [TaxId: 9606]
d2gfqb_ : (GLY131) (ASN181) [view usage] : c.56.7.1 |Phosphorylase/hydrolase-like |AF0625-like |AF0625-like |Hypothetical protein PH0006 |Pyrococcus horikoshii [TaxId: 53953]
d3dhgc_ : (SER2) (VAL43) [view usage] : d.15.12.0 |beta-Grasp (ubiquitin-like) |TmoB-like |automated matches |automated matches |Pseudomonas mendocina [TaxId: 300]
d3tqva1 : (ASN74) (GLY119) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Francisella tularensis [TaxId: 177416]
d2a1tr2 : (ILE269) (LYS294) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cdda_ : (THR134) (GLY187) [view usage] : c.65.1.1 |Formyltransferase |Formyltransferase |Formyltransferase |Glycinamide ribonucleotide transformylase, GART |Escherichia coli [TaxId: 562]
d2rsua_ : (MET1) (GLU34) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin |Human (Homo sapiens) [TaxId: 9606]
d1jkya1 : (TYR118) (ASN164) [view usage] : d.92.1.14 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Anthrax toxin lethal factor, N- and C-terminal domains |Anthrax toxin lethal factor, N- and C-terminal domains |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2h9fa2 : (LYS277) (GLY340) [view usage] : d.21.1.4 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PA0793-like |Hypothetical protein PA0793 |Pseudomonas aeruginosa [TaxId: 287]
d1h19a3 : (GLY268) (THR307) [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Leukotriene A4 hydrolase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1r1da_ : (PRO8) (GLY42) [view usage] : c.69.1.29 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/lipase |Carboxylesterase Est |Bacillus stearothermophilus [TaxId: 1422]
d2b5ea2 : (LEU202) (ALA237) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3e7gc_ : (ILE265) (GLY294) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2zcia1 : (ASP201) (GLU243) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1z1wa2 : (GLY230) (THR277) [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Tricorn protease interacting factor F3 catalytic domain |Thermoplasma acidophilum [TaxId: 2303]
d1tfea_ : (ILE59) (MET102) [view usage] : d.43.1.1 |EF-Ts domain-like |Elongation factor Ts (EF-Ts), dimerisation domain |Elongation factor Ts (EF-Ts), dimerisation domain |Elongation factor Ts (EF-Ts), dimerisation domain |Thermus thermophilus [TaxId: 274]
d2hpua1 : (LYS35) (ALA66) [view usage] : d.357.1.1 |NosL/MerB-like |NosL/MerB-like |NosL-like |NosL |Achromobacter cycloclastes [TaxId: 223]
d2ihr1_ : (ASN314) (ARG351) [view usage] : e.38.1.0 |Release factor |Release factor |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
d3gb8b1 : (GLY256) (LEU286) [view usage] : d.142.2.5 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |m3G-cap binding domain of snurportin-1 |m3G-cap binding domain of snurportin-1 |Human (Homo sapiens) [TaxId: 9606]
d1hs6a3 : (LEU209) (GLU233) [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Leukotriene A4 hydrolase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d4dwfa_ : (ASP15) (SER51) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gfqa1 : (GLY131) (ASN181) [view usage] : c.56.7.1 |Phosphorylase/hydrolase-like |AF0625-like |AF0625-like |Hypothetical protein PH0006 |Pyrococcus horikoshii [TaxId: 53953]
d3logb_ : (ARG405) (LEU446) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d2hcma_ : (PRO10) (GLY36) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3logd_ : (ARG405) (LEU446) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d1ww9a2 : (MET280) (ASN331) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Terminal oxygenase component of carbazole CarAa |Janthinobacterium sp. J3 [TaxId: 213804]
d1xk5a_ : (GLY256) (GLY287) [view usage] : d.142.2.5 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |m3G-cap binding domain of snurportin-1 |m3G-cap binding domain of snurportin-1 |Human (Homo sapiens) [TaxId: 9606]
d1fmtb2 : (GLY135) (ASP188) [view usage] : c.65.1.1 |Formyltransferase |Formyltransferase |Formyltransferase |Methionyl-tRNAfmet formyltransferase |Escherichia coli [TaxId: 562]
d1fnua1 : (HIS44) (LYS74) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |Streptococcal pyrogenic exotoxin A1 |Streptococcus pyogenes [TaxId: 1314]
d2gupa2 : (ALA118) (LYS179) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Hypothetical protein SP2142 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1fmta2 : (GLY135) (ASP188) [view usage] : c.65.1.1 |Formyltransferase |Formyltransferase |Formyltransferase |Methionyl-tRNAfmet formyltransferase |Escherichia coli [TaxId: 562]
d1tu1a_ : (ARG96) (LEU137) [view usage] : d.107.1.3 |Mog1p/PsbP-like |Mog1p/PsbP-like |PA0094-like |Hypothetical protein PA0094 |Pseudomonas aeruginosa [TaxId: 287]
d1w93a3 : (PRO248) (ILE282) [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |Acetyl-CoA carboxylase, BC-M subdomain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1j4xa_ : (PRO29) (LEU54) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |VH1-related dual-specificity phosphatase, VHR |Human (Homo sapiens) [TaxId: 9606]
d1izya_ : (ARG250) (TYR281) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d3r9tb_ : (GLY6) (HIS46) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
d1bw3a_ : (LYS65) (ASP103) [view usage] : b.52.1.2 |Double psi beta-barrel |Barwin-like endoglucanases |Barwin |Barwin |Barley (Hordeum vulgare) [TaxId: 4513]
d3fz2e_ : (ALA41) (ASP94) [view usage] : d.323.1.1 |Phage tail protein-like |Phage tail protein-like |Lambda phage gpU-like |automated matches |Enterobacteria phage [TaxId: 10710]
d4gaaa2 : (LEU206) (GLU230) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1x0oa_ : (THR10) (LEU41) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2a1ua2 : (ILE269) (LYS294) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4eewb_ : (ASP15) (SER51) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s68a_ : (ASN40) (ALA90) [view usage] : d.142.2.4 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |RNA ligase |RNA ligase 2, N-terminal domain |Bacteriophage T4 [TaxId: 10665]
d2zc3b_ : (PHE570) (MET614) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2x (pbp-2x), transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3bdja3 : (ASN288) (LYS318) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Xanthine oxidase, domain 3 (?) |Cow (Bos taurus) [TaxId: 9913]
d3f1ex_ : (ASN332) (GLU376) [view usage] : e.38.1.0 |Release factor |Release factor |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
d1y5ya_ : (PHE49) (GLY102) [view usage] : d.14.1.12 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Formaldehyde-activating enzyme, FAE |Formaldehyde-activating enzyme, FAE |Methylobacterium extorquens [TaxId: 408]
d2l05a_ : (PRO155) (GLY189) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3bzma_ : (ARG387) (LEU428) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |automated matches |Escherichia coli [TaxId: 562]
d1akla2 : (ALA134) (GLY183) [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Pseudomonas aeruginosa [TaxId: 287]
d1bcca1 : (GLY83) (GLN118) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Chicken (Gallus gallus) [TaxId: 9031]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.69, i.1, c.56, d.92, c.14, c.45, d.129, c.23, b.40, c.47, d.185, c.55, d.14, d.174, c.31, d.110, c.43, c.109, d.21,
b.52, d.142, d.41, d.145, c.65, d.15, e.38, d.161, d.323, d.107, d.22, d.43, d.357