Protein Concepts Dictionary

Tableau information

Concept source:  d3llba_  amino acid (a.a.) range (TYR2)(PHE46)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (TYR2)    (PRO7) E1
	    (GLY9)   (ALA15) E2
	   (VAL19)   (PHE25) H3
	   (THR37)   (PHE46) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
E2      160.3°   E2                   
H3      -28.0°  171.5°   H3            
H4       75.7°  -92.3°  -94.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4e4ja_ :   (PRO205)  (THR243)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Mycoplasma penetrans [TaxId: 272633]
 d2j0111 :    (VAL49)   (GLU93)   [view usage] : d.325.1.1 |L28p-like |L28p-like |Ribosomal protein L28 |Ribosomal protein L28 (L28p) |Thermus thermophilus [TaxId: 274]
 d1hska1 :   (ASP102)  (MET150)   [view usage] : d.145.1.2 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain |Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain |Staphylococcus aureus [TaxId: 1280]
 d1i19a2 :   (ASN147)  (ALA198)   [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Cholesterol oxidase |Brevibacterium sterolicum [TaxId: 1702]
 d1w1ha_ :   (TYR415)  (PHE451)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
 d2plsh_ :   (ASN344)  (LEU392)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Hypothetical protein CT0541 |Chlorobium tepidum [TaxId: 1097]
 d3laea_ :    (SER-2)   (LEU43)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Hypothetical protein HI0107 |Haemophilus influenzae [TaxId: 727]
 d2plsb_ :   (ASN344)  (GLY393)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Hypothetical protein CT0541 |Chlorobium tepidum [TaxId: 1097]
 d1w1hd_ :   (ILE416)  (PHE451)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
 d1lxya_ :   (PRO162)  (THR200)   [view usage] : d.126.1.4 |Pentein, beta/alpha-propeller |Pentein |Arginine deiminase |Arginine deiminase |Mycoplasma arginini [TaxId: 2094]
 d3h79a_ :    (ARG16)   (THR70)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d2r2za1 :     (LEU6)   (GLY51)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Putative hemolysin EF0700 |Enterococcus faecalis [TaxId: 1351]
 d2io3b1 :    (LEU20)   (GLU77)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-2 |Human (Homo sapiens) [TaxId: 9606]
 d1w1hb_ :   (TYR415)  (PHE451)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
 d2i0ka2 :   (ASN147)  (ALA198)   [view usage] : d.145.1.0 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |automated matches |automated matches |Brevibacterium sterolicum [TaxId: 1702]
 d2p13a1 :   (VAL434)  (GLN479)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Uncharacterized protein NE2227 |Nitrosomonas europaea [TaxId: 915]
 d1w1hc_ :   (TYR415)  (PHE451)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47,   d.126,    b.55,   d.145,    d.15,   d.325