Tableau information
Concept source: d3qdsa_ amino acid (a.a.) range (LEU63)(LYS108)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU63) (GLY69) E1
(LYS74) (GLY82) E2
(THR88) (ASN98) H3
(ALA103) (LYS108) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 170.6° E2
H3 -39.5° 133.9° H3
H4 -50.7° 137.7° -68.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1vs6g1 : (ALA39) (GLY81) [view usage] : d.141.1.1 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Escherichia coli [TaxId: 562]
d1visa1 : (GLU43) (GLY71) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |Mevalonate kinase |Methanococcus jannaschii [TaxId: 2190]
d1mc0a1 : (GLN321) (ASP401) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains |Mouse (Mus musculus) [TaxId: 10090]
d4hsla_ : (LEU118) (ARG161) [view usage] : b.82.1.20 |Double-stranded beta-helix |RmlC-like cupins |3-hydroxyanthranilic acid dioxygenase-like |3-hydroxyanthranilate-3,4-dioxygenase |Ralstonia metallidurans [TaxId: 119219]
d2rmla1 : (THR35) (LYS66) [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |automated matches |Bacillus subtilis [TaxId: 1423]
d1khvb_ : (ALA347) (TYR378) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Rabbit hemorrhagic disease virus [TaxId: 11976]
d2f2fb1 : (GLN142) (PRO184) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |Cytolethal distending toxin subunit B |Actinobacillus actinomycetemcomitans [TaxId: 714]
d1yfua1 : (MET117) (ARG161) [view usage] : b.82.1.20 |Double-stranded beta-helix |RmlC-like cupins |3-hydroxyanthranilic acid dioxygenase-like |3-hydroxyanthranilate-3,4-dioxygenase |Ralstonia metallidurans [TaxId: 119219]
d1zvfa1 : (GLY117) (THR162) [view usage] : b.82.1.20 |Double-stranded beta-helix |RmlC-like cupins |3-hydroxyanthranilic acid dioxygenase-like |3-hydroxyanthranilate-3,4-dioxygenase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1zvfb_ : (GLY117) (THR162) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4hlta_ : (PRO249) (LYS282) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |Pirin |Human (Homo sapiens) [TaxId: 9606]
d1xn5a_ : (GLY77) (GLU138) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Hypothetical protein BH1534 |Bacillus halodurans [TaxId: 86665]
d4iqfa1 : (GLY133) (GLY187) [view usage] : c.65.1.0 |Formyltransferase |Formyltransferase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d4g0nb_ : (ASN56) (GLY90) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |c-Raf1 RBD |Human (Homo sapiens) [TaxId: 9606]
d1n6za_ : (GLY70) (ASN105) [view usage] : d.263.1.1 |Hypothetical protein Yml108w |Hypothetical protein Yml108w |Hypothetical protein Yml108w |Hypothetical protein Yml108w |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3fz2d_ : (ALA41) (ILE102) [view usage] : d.323.1.1 |Phage tail protein-like |Phage tail protein-like |Lambda phage gpU-like |automated matches |Enterobacteria phage [TaxId: 10710]
d4iqfb1 : (GLY133) (GLY187) [view usage] : c.65.1.0 |Formyltransferase |Formyltransferase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3jv1a_ : (GLY127) (LEU169) [view usage] : d.25.1.0 |Mitochondrial glycoprotein MAM33-like |Mitochondrial glycoprotein MAM33-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1gw6a3 : (LEU209) (LEU247) [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Leukotriene A4 hydrolase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d3n1xa_ : (VAL414) (GLU445) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, b.82, d.58, d.92, d.129, d.151, d.14, d.110, a.25, c.65, b.97, d.15, d.25, d.323, d.141, d.263