Tableau information
Concept source: d3qfua2 amino acid (a.a.) range (MET323)(LYS357)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET323) (ILE329) E1
(GLY335) (ARG344) E2
(ARG344) (ASN351) H3
(ASN351) (LYS357) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.1° E2
H3 84.6° -81.3° H3
H4 116.3° -51.5° -58.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3u40d_ : (SER207) (ALA237) [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d2ma9c_ : (VAL1) (GLY32) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |Elongin C |Human (Homo sapiens) [TaxId: 9606]
d1f82a_ : (LYS328) (LYS365) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype B [TaxId: 1491]
d4czma2 : (GLY230) (THR277) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
d1lb8b_ : (ASP216) (ASP257) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d4fioc_ : (GLY98) (ASP129) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d1xoca1 : (LYS88) (GLU124) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Bacillus subtilis [TaxId: 1423]
d1cbka_ : (ASN103) (ILE131) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Haemophilus influenzae [TaxId: 727]
d2vzea_ : (SER216) (GLY250) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qpfa_ : (PHE287) (GLY313) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2vdca3 : (GLY388) (GLN421) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Alpha subunit of glutamate synthase, N-terminal domain |Azospirillum brasilense [TaxId: 192]
d4fiob_ : (GLY98) (ASP129) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d4hsva_ : (ALA39) (GLU69) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ynjd1 : (GLY1043) (HIS1103) [view usage] : e.29.1.2 |beta and beta-prime subunits of DNA dependent RNA-polymerase |beta and beta-prime subunits of DNA dependent RNA-polymerase |RNA-polymerase beta-prime |RNA-polymerase beta-prime |Thermus aquaticus [TaxId: 271]
d1eg9b_ : (GLU561) (LYS613) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Naphthalene 1,2-dioxygenase beta subunit |Pseudomonas putida [TaxId: 303]
d1l8ra_ : (ALA199) (GLY224) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |Retinal determination protein Dachshund |Human (Homo sapiens) [TaxId: 9606]
d2e8aa2 : (THR278) (SER312) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4h24c_ : (PHE331) (GLY368) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d3b7wa_ : (SER216) (GLY250) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3awpa_ : (VAL291) (TRP326) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
d1zn3a_ : (GLY307) (GLN343) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
d4czla2 : (GLY230) (ALA276) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
d3wfla_ : (GLN340) (ILE375) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Talaromyces trachyspermus [TaxId: 28566]
d1mx9d_ : (GLU4524) (LYS4553) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Mammalian carboxylesterase (liver carboxylesterase I) |Human (Homo sapiens) [TaxId: 9606]
d1fzua_ : (ASP3) (GLY30) [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
d4fioa_ : (GLY98) (ASP129) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d4hoha_ : (ASP3) (GLY30) [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
d1gqfa_ : (ASN241) (LEU274) [view usage] : c.17.1.1 |Caspase-like |Caspase-like |Caspase catalytic domain |Caspase-7 |Human (Homo sapiens) [TaxId: 9606]
d2j51a_ : (LYS150) (CYS204) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |STE20-like serine/threonine-protein kinase, SLK |Human (Homo sapiens) [TaxId: 9606]
d1ofda3 : (GLY387) (ILE421) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Alpha subunit of glutamate synthase, N-terminal domain |Synechocystis sp. [TaxId: 1143]
d2r86a2 : (GLY265) (ARG305) [view usage] : d.142.1.9 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |PurP ATP-binding domain-like |5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP |Pyrococcus furiosus [TaxId: 2261]
d2nmla1 : (ASP66) (GLN101) [view usage] : d.330.1.1 |ERH-like |ERH-like |ERH-like |Enhancer of rudimentary homolog, ERH |Mouse (Mus musculus) [TaxId: 10090]
d3eq5h_ : (SER155) (ARG176) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gnia2 : (THR292) (GLY339) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d1oypa2 : (VAL199) (VAL236) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH, domain 2 |Bacillus subtilis [TaxId: 1423]
d2yhea1 : (LEU319) (THR348) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
d2hmjb_ : (GLU61) (LYS113) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Naphthalene 1,2-dioxygenase beta subunit |Pseudomonas sp. [TaxId: 306]
d4fogc_ : (ARG99) (SER125) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3ekbb_ : (PHE331) (TRP367) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d4czjb2 : (GLY230) (THR277) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
d1bira_ : (ASP3) (GLY30) [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
d3u40a_ : (SER207) (ALA237) [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d4gnib2 : (THR292) (GLY339) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d3dxjd_ : (GLY1043) (ASP1090) [view usage] : e.29.1.2 |beta and beta-prime subunits of DNA dependent RNA-polymerase |beta and beta-prime subunits of DNA dependent RNA-polymerase |RNA-polymerase beta-prime |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1sq0b_ : (VAL227) (TYR259) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |von Willebrand factor binding domain of glycoprotein Ib alpha |Human (Homo sapiens) [TaxId: 9606]
d1i1sa_ : (LEU61) (LYS96) [view usage] : a.4.5.9 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Transcription factor MotA, activation domain |Transcription factor MotA, activation domain |Bacteriophage T4 [TaxId: 10665]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.69, c.94, a.104, d.58, c.56, d.157, a.102, d.117, d.92, d.144, c.55, d.153, e.23, d.17, d.142, a.4, d.1, d.42,
c.17, d.101, d.9, a.6, e.29, d.147, d.330