Tableau information
Concept source: d3vcya_ amino acid (a.a.) range (GLY150)(ASN185)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY150) (HIS156) E1
(HIS156) (LYS161) E2
(SER163) (THR175) H3
(GLY179) (ASN185) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -74.6° E2
H3 -122.7° 161.1° H3
E4 49.1° -25.8° -171.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fxwf_ : (ASN92) (LEU137) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha2 [TaxId: 9913]
d2gg6a_ : (LYS160) (PRO196) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d3us8b_ : (ILE4) (VAL46) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3bbnl1 : (ARG94) (LYS123) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d2iypb1 : (LEU136) (ALA176) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Lactococcus lactis [TaxId: 1358]
d1iola_ : (GLY82) (THR140) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1ecfb1 : (LEU293) (GLN322) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Glutamine PRPP amidotransferase, C-terminal domain |Escherichia coli [TaxId: 562]
d2m4na_ : (ARG74) (ILE103) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2z3gd_ : (GLY69) (ILE105) [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
d2z3hd_ : (GLY69) (ILE105) [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
d1bwra_ : (HIS91) (LEU136) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d3nvsa_ : (THR373) (ASP406) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 666]
d1hp4a2 : (PRO34) (THR73) [view usage] : d.92.2.1 |Zincin-like |beta-N-acetylhexosaminidase-like domain |beta-N-acetylhexosaminidase domain |beta-N-acetylhexosaminidase, N-terminal domain |Streptomyces plicatus [TaxId: 1922]
d1rf4a_ : (LYS153) (GLU188) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2v9tb_ : (GLN423) (SER459) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gb8b1 : (ASP168) (GLY231) [view usage] : d.142.2.5 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |m3G-cap binding domain of snurportin-1 |m3G-cap binding domain of snurportin-1 |Human (Homo sapiens) [TaxId: 9606]
d2bmia_ : (HIS72) (ASN104) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
d2d0fa3 : (PRO347) (TYR397) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d1bwpa_ : (HIS91) (LEU136) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d2gg4a_ : (LYS160) (PRO196) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d2kvka_ : (SER76) (ASN119) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Leishmania donovani [TaxId: 5661]
d1bwqa_ : (HIS91) (LEU136) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d1a7ta_ : (HIS72) (ALA103) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
d2i5ia1 : (GLY120) (SER158) [view usage] : c.6.2.8 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |YdjC-like |Uncharacterized protein EF3048 |Enterococcus faecalis [TaxId: 1351]
d2ggda_ : (LYS160) (PRO196) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d1a27a_ : (GLY82) (VAL143) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, d.68, c.2, c.6, i.1, d.157, d.92, c.77, c.23, c.97, c.61, d.142, d.109, d.15