Tableau information
Concept source: d2cz4a1 amino acid (a.a.) range (LYS31)(GLU89)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS31) (GLU41) E1
(GLN54) (THR60) E2
(SER63) (TYR78) H3
(ALA83) (GLU89) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 147.3° E2
H3 -44.6° 149.9° H3
E4 128.3° -26.8° -166.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3n5mb_ : (GLY366) (ASN411) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3v4ma_ : (LYS413) (TYR463) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2hxva1 : (ASN201) (THR243) [view usage] : c.71.1.2 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |RibD C-terminal domain-like |Riboflavin biosynthesis protein RibD |Thermotoga maritima [TaxId: 2336]
d2v0na3 : (GLY397) (ALA454) [view usage] : d.58.29.2 |Ferredoxin-like |Nucleotide cyclase |GGDEF domain |Response regulator PleD, C-terminal domain |Caulobacter crescentus [TaxId: 155892]
d1f9na2 : (VAL85) (ASP125) [view usage] : d.74.2.1 |DCoH-like |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |Bacillus subtilis [TaxId: 1423]
d2h9fa1 : (PRO10) (LYS76) [view usage] : d.21.1.4 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PA0793-like |Hypothetical protein PA0793 |Pseudomonas aeruginosa [TaxId: 287]
d1npza_ : (LYS82) (HIS142) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin S |Human (Homo sapiens) [TaxId: 9606]
d4ntla_ : (VAL171) (TYR202) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d1q5fa_ : (GLY96) (ASN145) [view usage] : d.24.1.1 |Pili subunits |Pili subunits |Pilin |Type IVb pilin PilS |Salmonella typhi [TaxId: 90370]
d3h0ub_ : (LYS15) (SER63) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Streptomyces avermitilis [TaxId: 33903]
d1ynha_ : (ASN178) (GLN236) [view usage] : d.126.1.7 |Pentein, beta/alpha-propeller |Pentein |Succinylarginine dihydrolase-like |automated matches |Escherichia coli [TaxId: 562]
d2piaa2 : (GLU188) (GLU223) [view usage] : c.25.1.2 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Aromatic dioxygenase reductase-like |Phthalate dioxygenase reductase |Pseudomonas cepacia, db01 [TaxId: 292]
d1x3la_ : (LYS43) (THR80) [view usage] : c.118.1.0 |GckA/TtuD-like |GckA/TtuD-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1cg2a2 : (THR266) (ARG324) [view usage] : d.58.19.1 |Ferredoxin-like |Bacterial exopeptidase dimerisation domain |Bacterial exopeptidase dimerisation domain |Carboxypeptidase G2 |Pseudomonas sp., strain rs-16 [TaxId: 306]
d1ynia1 : (ASN178) (GLN236) [view usage] : d.126.1.7 |Pentein, beta/alpha-propeller |Pentein |Succinylarginine dihydrolase-like |Succinylarginine dihydrolase |Escherichia coli [TaxId: 562]
d2dgua_ : (ARG366) (PHE405) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1r8pa_ : (SER33) (ILE81) [view usage] : d.58.8.1 |Ferredoxin-like |Viral DNA-binding domain |Viral DNA-binding domain |Papillomavirus-1 E2 protein |Human papillomavirus type 16 [TaxId: 333760]
d3qsia_ : (LEU95) (LYS140) [view usage] : d.58.18.0 |Ferredoxin-like |ACT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 563041]
d4i50b1 : (TYR52) (SER97) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1fnoa3 : (ALA264) (GLU316) [view usage] : d.58.19.1 |Ferredoxin-like |Bacterial exopeptidase dimerisation domain |Bacterial exopeptidase dimerisation domain |Peptidase T (tripeptidase) |Salmonella typhimurium [TaxId: 90371]
d1f2ha_ : (LYS63) (GLY121) [view usage] : d.58.22.1 |Ferredoxin-like |TRADD, N-terminal domain |TRADD, N-terminal domain |TRADD, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2m3da_ : (GLY56) (VAL92) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ipba_ : (GLY151) (SER199) [view usage] : d.86.1.1 |eIF4e-like |eIF4e-like |Translation initiation factor eIF4e |Translation initiation factor eIF4e |Human (Homo sapiens) [TaxId: 9606]
d1zxib2 : (THR219) (ASP266) [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |automated matches |Oligotropha carboxidovorans [TaxId: 504832]
d1n5wb2 : (THR219) (ASP266) [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Carbon monoxide (CO) dehydrogenase molybdoprotein |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
d1b4aa2 : (ILE85) (ASP125) [view usage] : d.74.2.1 |DCoH-like |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |Bacillus stearothermophilus [TaxId: 1422]
d1pcaa2 : (LYS190) (SER242) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Pig (Sus scrofa) [TaxId: 9823]
d2y8ub_ : (THR34) (GLY74) [view usage] : c.6.2.0 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |automated matches |automated matches |Emericella nidulans [TaxId: 162425]
d3hcxa_ : (SER38) (ILE98) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Escherichia coli K-12 [TaxId: 83333]
d2cpza1 : (SER429) (LEU476) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CUG triplet repeat RNA-binding protein 1 |Human (Homo sapiens) [TaxId: 9606]
d1ynhb_ : (ASN178) (GLN236) [view usage] : d.126.1.7 |Pentein, beta/alpha-propeller |Pentein |Succinylarginine dihydrolase-like |automated matches |Escherichia coli [TaxId: 562]
d1ms6a_ : (LYS82) (GLY137) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin S |Human (Homo sapiens) [TaxId: 9606]
d2kyxa_ : (GLU44) (LEU81) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1dq8a1 : (GLN632) (ALA682) [view usage] : d.58.20.1 |Ferredoxin-like |NAD-binding domain of HMG-CoA reductase |NAD-binding domain of HMG-CoA reductase |NAD-binding domain of HMG-CoA reductase |Human (Homo sapiens) [TaxId: 9606]
d1r8ha_ : (SER315) (SER362) [view usage] : d.58.8.1 |Ferredoxin-like |Viral DNA-binding domain |Viral DNA-binding domain |Papillomavirus-1 E2 protein |Human papillomavirus type 6a [TaxId: 37122]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.94, c.6, d.58, c.56, c.14, d.3, c.32, c.71, d.126, d.133, c.25, d.21, d.74, d.86, d.24, c.118