Protein Concepts Dictionary

Tableau information

Concept source:  d1xtga_  amino acid (a.a.) range (ASN150)(ASP191)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN150)  (GLY155) E1
	  (ILE161)  (GLU171) E2
	  (ASN174)  (GLY179) H3
	  (GLY179)  (ASP191) E4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
E2      138.3°   E2                   
H3     -132.9°   88.4°   H3            
E4      -23.7°  154.4° -114.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1t3ca_ :   (ASN146)  (GLU188)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype E [TaxId: 1491]
 d1f82a_ :   (ASN156)  (GLU197)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype B [TaxId: 1491]
 d1mzya1 :   (GLY148)  (PRO190)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Rhodobacter sphaeroides [TaxId: 1063]
 d2isga_ :   (ASN150)  (ASP191)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d2isea_ :   (ASN150)  (ASP191)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d3bwia_ :   (ASN150)  (ASP191)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d3deba_ :   (SER155)  (ILE194)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d3h5qa3 :   (TYR334)  (LYS382)   [view usage] : d.41.3.0 |alpha/beta-Hammerhead |Pyrimidine nucleoside phosphorylase C-terminal domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d1zn3a_ :   (ASN146)  (GLU188)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d2avfd1 :   (GLY117)  (LEU157)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Achromobacter cycloclastes [TaxId: 223]
 d2gpra_ :    (ASN10)   (PRO47)   [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |Glucose permease IIa domain, IIa-glc |Mycoplasma capricolum [TaxId: 2095]
 d2wk5a3 :   (ARG376)  (VAL425)   [view usage] : d.41.3.0 |alpha/beta-Hammerhead |Pyrimidine nucleoside phosphorylase C-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1sf8a_ :   (LYS524)  (ASP573)   [view usage] : d.271.1.1 |HSP90 C-terminal domain |HSP90 C-terminal domain |HSP90 C-terminal domain |Chaperone protein HtpG |Escherichia coli [TaxId: 562]
 d1n5za_ :    (LYS13)   (LYS36)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Peroxisomal membrane protein Pex13p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1xtga_ :   (ASN150)  (ASP191)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d1epwa3 :   (ASN156)  (GLU197)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype B [TaxId: 1491]
 d1gmwa1 :     (MSE1)   (ASP36)   [view usage] : b.107.1.1 |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Klebsiella aerogenes [TaxId: 28451]
 d1gmua1 :     (MET1)   (LEU34)   [view usage] : b.107.1.1 |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Klebsiella aerogenes [TaxId: 28451]
 d2avfa1 :   (GLY117)  (LEU157)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Achromobacter cycloclastes [TaxId: 223]
 d3c88a_ :   (ASN150)  (ASP191)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d1sh8a_ :    (LYS81)  (ASP129)   [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA5026 |Pseudomonas aeruginosa [TaxId: 287]
 d4el4a_ :   (ASN150)  (ASP191)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d3h4fa1 :   (GLY117)  (PRO158)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Alcaligenes faecalis [TaxId: 511]
 d2qn0a_ :   (SER155)  (ILE194)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d1xtfa_ :   (ASN150)  (ASP191)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d2bw4a1 :   (GLY117)  (PRO158)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Achromobacter cycloclastes [TaxId: 223]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92,     b.6,    d.38,    b.84,    d.41,    b.34,   b.107,   d.271