Tableau information
Concept source: d1yk3e_ amino acid (a.a.) range (TYR90)(ASP135)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR90) (ILE95) E1
(GLY104) (TRP110) E2
(ASP114) (TYR120) H3
(TYR125) (ASP135) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.7° E2
H3 120.2° -58.1° H3
E4 -25.6° 168.6° 122.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mr1c_ : (ARG219) (ARG270) [view usage] : d.217.1.2 |SAND domain-like |SAND domain-like |SMAD4-binding domain of oncoprotein Ski |SMAD4-binding domain of oncoprotein Ski |Human (Homo sapiens) [TaxId: 9606]
d1h2ca_ : (SER119) (LEU158) [view usage] : b.31.1.1 |EV matrix protein |EV matrix protein |EV matrix protein |EV matrix protein |Ebola virus [TaxId: 205488]
d1h2da_ : (SER119) (LEU158) [view usage] : b.31.1.1 |EV matrix protein |EV matrix protein |EV matrix protein |EV matrix protein |Ebola virus [TaxId: 205488]
d1g6oa_ : (PRO102) (ARG133) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d4ldma_ : (SER119) (LEU158) [view usage] : b.31.1.1 |EV matrix protein |EV matrix protein |EV matrix protein |automated matches |Ebola virus [TaxId: 186538]
d2pt7c_ : (PRO102) (PRO135) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d2cu5a_ : (GLY3) (VAL38) [view usage] : d.273.1.0 |YjbQ-like |YjbQ-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2cu5b_ : (VAL5) (VAL38) [view usage] : d.273.1.0 |YjbQ-like |YjbQ-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1lr5a_ : (MET15) (SER49) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Auxin binding protein |Maize (Zea mays) [TaxId: 4577]
d2iera1 : (THR60) (GLY98) [view usage] : d.14.1.7 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC |UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC |Aquifex aeolicus [TaxId: 63363]
d117ea_ : (THR1) (VAL47) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xi0a_ : (ALA114) (PHE144) [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |automated matches |Xerocomus chrysenteron [TaxId: 5386]
d2pt7b_ : (PRO102) (THR138) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d1e6aa_ : (THR1) (VAL47) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1eesa_ : (VAL36) (ASP76) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
d1eucb2 : (GLU114) (ASP157) [view usage] : d.142.1.4 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Succinyl-CoA synthetase, beta-chain, N-terminal domain |Succinyl-CoA synthetase, beta-chain, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1h2db_ : (SER119) (LEU158) [view usage] : b.31.1.1 |EV matrix protein |EV matrix protein |EV matrix protein |EV matrix protein |Ebola virus [TaxId: 205488]
d1lr5b_ : (MET15) (SER49) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Auxin binding protein |Maize (Zea mays) [TaxId: 4577]
d2ik6b_ : (THR1) (VAL47) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2pt7a_ : (PRO102) (ARG133) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d2h0bd_ : (VAL448) (GLY474) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Ligand-binding domain of neurexin 1beta |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, b.29, b.40, c.37, d.14, d.108, b.31, d.142, d.273, b.97, d.217