Tableau information
Concept source: d1r6ma2 amino acid (a.a.) range (ALA161)(VAL191)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA161) (ILE167) E1
(VAL171) (ASP175) E2
(TYR178) (ALA184) H3
(GLU185) (VAL191) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 155.2° E2
H3 51.2° -136.4° H3
E4 164.5° -40.1° -122.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1r6la2 : (ALA161) (VAL191) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH, domain 2 |Pseudomonas aeruginosa [TaxId: 287]
d1r6ma2 : (ALA161) (VAL191) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH, domain 2 |Pseudomonas aeruginosa [TaxId: 287]
d2akab1 : (GLU79) (TYR125) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Dynamin G domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1qavb_ : (GLY1061) (GLY1102) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Neuronal nitric oxide synthase, NNOS |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4af6a1 : (LYS103) (GLU148) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
d3dd6a2 : (TYR158) (THR193) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH, domain 2 |Bacillus anthracis
d4i0ub1 : (GLU28) (THR65) [view usage] : d.328.1.1 |CorA soluble domain-like |CorA soluble domain-like |CorA soluble domain-like |automated matches |Thermotoga maritima [TaxId: 243274]
d1m8q0_ : (SER33) (ILE71) [view usage] : i.15.1.1 |Muscle protein complexes |Muscle protein complexes |Muscle protein complexes |Averaged rigor crossbridges from tomograms of insect flight muscle |Chicken (Gallus gallus) and Rabbit (Oryctolagus cuniculus) [TaxId: 9031]
d3cqxa1 : (SER40) (ASP69) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1atra1 : (SER40) (ASP69) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
d1oysa2 : (ASP157) (THR193) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH, domain 2 |Bacillus subtilis [TaxId: 1423]
d3hbpa1 : (GLY234) (PRO310) [view usage] : d.176.1.0 |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2outa2 : (MET4) (GLY59) [view usage] : d.344.1.1 |GINS/PriA/YqbF domain |PriA/YqbF domain |YqbF N-terminal domain-like |Mu-like prophage FluMu protein gp35, HI1506 |Haemophilus influenzae [TaxId: 727]
d1obza2 : (GLU235) (PHE273) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Syntenin 1 |Human (Homo sapiens) [TaxId: 9606]
d1ntea_ : (GLU235) (PHE273) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Syntenin 1 |Human (Homo sapiens) [TaxId: 9606]
d2ra2c_ : (PRO4) (ALA53) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |Uncharacterized protein YgdI |Salmonella typhimurium [TaxId: 90371]
d1oypa2 : (ALA160) (THR193) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH, domain 2 |Bacillus subtilis [TaxId: 1423]
d1vr3a1 : (MSE1) (LYS40) [view usage] : b.82.1.6 |Double-stranded beta-helix |RmlC-like cupins |Acireductone dioxygenase |Acireductone dioxygenase |Mouse (Mus musculus) [TaxId: 10090]
d1nf3c_ : (ASN212) (ASN253) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |GTPase-binding domain of the cell polarity protein par6 (Par-6B) |Mouse (Mus musculus) [TaxId: 10090]
d1qaua_ : (GLY61) (GLY102) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Neuronal nitric oxide synthase, NNOS |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3i3ya_ : (LEU-1) (GLY61) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, c.72, c.37, c.55, i.15, d.176, d.328, b.38, b.43, b.36, d.101, d.344