Tableau information
Concept source: d1i13b_ amino acid (a.a.) range (HIS106)(LEU140)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS106) (ASP112) E1
(ASP112) (THR116) E2
(LEU118) (ARG131) H3
(SER134) (LEU140) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 81.8° E2
H3 167.0° -104.0° H3
E4 -19.1° -97.5° 158.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mosa_ : (PRO515) (PHE546) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
d2dtge4 : (GLY5) (GLY31) [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |Insulin receptor |Human (Homo sapiens) [TaxId: 9606]
d1yqea1 : (TRP184) (GLY211) [view usage] : c.56.7.1 |Phosphorylase/hydrolase-like |AF0625-like |AF0625-like |Hypothetical protein AF0625 |Archaeoglobus fulgidus [TaxId: 2234]
d1b49a_ : (ASN162) (GLY213) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |dCMP hydroxymethylase |Bacteriophage T4 [TaxId: 10665]
d2ow6a3 : (THR198) (ARG228) [view usage] : c.6.2.1 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |alpha-mannosidase |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1pj4a2 : (ALA157) (VAL205) [view usage] : c.58.1.3 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Malic enzyme N-domain |Mitochondrial NAD(P)-dependent malic enzyme |Human (Homo sapiens) [TaxId: 9606]
d3mpzc_ : (VAL71) (ALA106) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d4m0kb_ : (ARG119) (LEU153) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Rhodothermus marinus [TaxId: 518766]
d3us3a1 : (GLU31) (ASP76) [view usage] : c.47.1.3 |Thioredoxin fold |Thioredoxin-like |Calsequestrin |Calsequestrin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1s70a_ : (LEU59) (GLY91) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Protein phosphatase-1 (PP-1) |Human (Homo sapiens), gamma isoform [TaxId: 9606]
d4pyna_ : (SER103) (GLU133) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4e2ba_ : (GLY55) (ALA107) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d2df8b_ : (THR237) (SER268) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1v3aa_ : (THR43) (PRO69) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Protein tyrosine phosphatase type IVa |Human (Homo sapiens), pr-3 [TaxId: 9606]
d4m0kc_ : (ARG119) (LEU153) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Rhodothermus marinus [TaxId: 518766]
d1gz4a2 : (ALA157) (VAL205) [view usage] : c.58.1.3 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Malic enzyme N-domain |Mitochondrial NAD(P)-dependent malic enzyme |Human (Homo sapiens) [TaxId: 9606]
d1g5ba_ : (ARG13) (VAL47) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |lambda ser/thr protein phosphatase |Bacteriophage lambda [TaxId: 10710]
d3u81a_ : (SER60) (GLU90) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1fjma_ : (LEU59) (GLY91) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Protein phosphatase-1 (PP-1) |Rabbit (Oryctolagus cuniculus), alpha isoform [TaxId: 9986]
d4e2da_ : (GLY55) (LEU104) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d4m0ka_ : (ARG119) (LEU153) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Rhodothermus marinus [TaxId: 518766]
d4c5ja_ : (LYS4) (LEU38) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d1vk9a_ : (SER52) (LYS78) [view usage] : c.97.1.3 |Cytidine deaminase-like |Cytidine deaminase-like |Hypothetical protein TM1506 |Hypothetical protein TM1506 |Thermotoga maritima [TaxId: 2336]
d1vysx_ : (GLY52) (ARG106) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
d4oqpa_ : (GLY134) (LEU171) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d1dqna_ : (GLU120) (CYS149) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Guanine PRTase |Giardia intestinalis [TaxId: 5741]
d1nxza1 : (PRO4) (GLY45) [view usage] : b.122.1.2 |PUA domain-like |PUA domain-like |YggJ N-terminal domain-like |Hypothetical protein HI0303 |Haemophilus influenzae [TaxId: 727]
d1moqa_ : (PRO515) (PHE546) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
d1x1oa1 : (LEU41) (VAL78) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2o8aa_ : (LEU59) (GLY91) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Protein phosphatase-1 (PP-1) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2khsa_ : (THR33) (LYS78) [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
d1grxa_ : (MET1) (ASP37) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Glutaredoxin (Grx, thioltransferase) |Escherichia coli [TaxId: 562]
d1r3ua_ : (ASP96) (ILE130) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine-guanine PRTase (HGPRTase) |Thermoanaerobacter tengcongensis [TaxId: 119072]
d1l5ja2 : (GLY271) (VAL296) [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Aconitase B, second N-terminal domain |Escherichia coli [TaxId: 562]
d4fdma_ : (PRO9) (VAL53) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Bacillus sp. [TaxId: 307644]
d4jica_ : (GLY49) (ILE98) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 358]
d4pyka_ : (VAL111) (GLU140) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Human (Homo sapiens) [TaxId: 9606]
d1gnla_ : (LYS391) (GLY426) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d1tisa_ : (TYR168) (GLY213) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Bacteriophage T4 [TaxId: 10665]
d1usye_ : (ASP143) (ASP164) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Thermotoga maritima [TaxId: 2336]
d3n34a_ : (PRO132) (TYR167) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Plasmodium falciparum [TaxId: 36329]
d1do8a2 : (ALA157) (VAL205) [view usage] : c.58.1.3 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Malic enzyme N-domain |Mitochondrial NAD(P)-dependent malic enzyme |Human (Homo sapiens) [TaxId: 9606]
d4e8ba1 : (PRO4) (GLY45) [view usage] : b.122.1.0 |PUA domain-like |PUA domain-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1hwya1 : (GLY278) (GLY312) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d2wnsb_ : (THR147) (VAL173) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1foka4 : (GLU514) (SER547) [view usage] : c.52.1.12 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease FokI, C-terminal (catalytic) domain |Restriction endonuclease FokI, C-terminal (catalytic) domain |Flavobacterium okeanokoites [TaxId: 244]
d2deca_ : (THR237) (SER268) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.69, c.94, c.2, d.159, c.6, c.56, d.117, c.66, c.80, c.124, c.45, c.72, b.40, c.47, b.122, c.97, c.8, c.61,
c.52, d.41, e.26, c.58