Tableau information
Concept source: d1bo4b_ amino acid (a.a.) range (PRO102)(GLN145)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO102) (ILE108) E1
(TYR109) (SER114) E2
(GLY121) (GLY138) H3
(VAL141) (GLN145) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -34.0° E2
H3 167.8° 146.8° H3
E4 -30.5° -62.9° 141.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4e8ba2 : (GLY166) (LEU216) [view usage] : c.116.1.5 |alpha/beta knot |alpha/beta knot |YggJ C-terminal domain-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1oqaa_ : (GLN3) (GLU41) [view usage] : c.15.1.3 |BRCT domain |BRCT domain |BRCT domain |Breast cancer associated protein, BRCA1 |Human (Homo sapiens) [TaxId: 9606]
d2dpta_ : (THR151) (VAL189) [view usage] : d.108.1.6 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |LFTR-like |automated matches |Escherichia coli [TaxId: 562]
d2p0wa_ : (ASP232) (GLU276) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HAT1 |Human (Homo sapiens) [TaxId: 9606]
d1bo4b_ : (PRO102) (GLN145) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 3-N-acetyltransferase |Serratia marcescens [TaxId: 615]
d3w24a_ : (VAL245) (GLY293) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermoanaerobacterium saccharolyticum [TaxId: 1094508]
d4m1ra_ : (ILE214) (ALA255) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Soil metagenome [TaxId: 410658]
d3shia_ : (LEU114) (LYS151) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
d1mmpa_ : (LYS112) (LYS151) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Matrilysin (MMP-7) |Human (Homo sapiens) [TaxId: 9606]
d1kcxa2 : (GLY68) (PRO110) [view usage] : c.1.9.6 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Hydantoinase (dihydropyrimidinase), catalytic domain |Dihydropyrimidinase related protein-1 |Mouse (Mus musculus) [TaxId: 10090]
d1r54a_ : (GLY259) (GLY303) [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |ADAM33 |Human (Homo sapiens) [TaxId: 9606]
d2dptb_ : (THR151) (VAL189) [view usage] : d.108.1.6 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |LFTR-like |automated matches |Escherichia coli [TaxId: 562]
d1umsa_ : (THR95) (ARG134) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
d2ow9a_ : (LEU97) (ARG134) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
d2gnpa1 : (ASN135) (ALA174) [view usage] : c.124.1.8 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |SorC sugar-binding domain-like |Transcriptional regulator SP0247 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3ugja7 : (ALA1038) (MET1072) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |FGAM synthase PurL, amidotransferase domain |Salmonella enterica [TaxId: 90371]
d1r55a_ : (THR258) (GLY303) [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |ADAM33 |Human (Homo sapiens) [TaxId: 9606]
d1b5da_ : (LYS160) (GLY213) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |dCMP hydroxymethylase |Bacteriophage T4 [TaxId: 10665]
d3niya_ : (GLN251) (PHE296) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermotoga petrophila [TaxId: 390874]
d1bo4a_ : (PRO102) (GLN145) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 3-N-acetyltransferase |Serratia marcescens [TaxId: 615]
d2mlra_ : (HIS112) (LYS151) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
d3niyb_ : (GLN251) (PHE296) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermotoga petrophila [TaxId: 390874]
d1mmra_ : (LYS112) (LYS151) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Matrilysin (MMP-7) |Human (Homo sapiens) [TaxId: 9606]
d1vbra1 : (GLN748) (PHE793) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase |Thermotoga maritima [TaxId: 2336]
d3f7oa_ : (THR35) (LYS97) [view usage] : c.41.1.0 |Subtilisin-like |Subtilisin-like |automated matches |automated matches |Paecilomyces lilacinus [TaxId: 33203]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.117, d.92, c.124, c.23, d.108, c.41, c.116, c.15