Tableau information
Concept source: d3b0ja2 amino acid (a.a.) range (PHE255)(GLY300)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE255) (SER266) E1
(LYS268) (ASP277) E2
(ASP277) (PRO281) E3
(VAL286) (GLY300) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.6° E2
E3 131.0° -61.3° E3
H4 -33.3° 130.5° 139.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ty0a2 : (ILE104) (LYS147) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Streptococcal pyrogenic exotoxin Spe-J |Streptococcus pyogenes [TaxId: 1314]
d2al2a1 : (SER142) (ARG200) [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1eu3a2 : (THR97) (ALA143) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Streptococcal superantigen Smez-2 |Streptococcus pyogenes [TaxId: 1314]
d1guab_ : (ASN56) (LEU82) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |c-Raf1 RBD |Human (Homo sapiens) [TaxId: 9606]
d2gpfa1 : (ASP8) (GLU53) [view usage] : d.100.2.1 |MbtH/L9 domain-like |MbtH-like |MbtH-like |Uncharacterized protein PA2412 |Pseudomonas aeruginosa [TaxId: 287]
d1lo5d2 : (GLU122) (LYS166) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Staphylococcal enterotoxin A, SEA |Staphylococcus aureus [TaxId: 1280]
d1w6ba_ : (LEU21) (PRO66) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Neurotoxin I |Snake (Naja naja oxiana) [TaxId: 8657]
d1ts2a2 : (THR96) (GLY142) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Toxic shock syndrome toxin-1 (TSST-1) |Staphylococcus aureus [TaxId: 1280]
d1c1yb_ : (ASN56) (LEU82) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |c-Raf1 RBD |Human (Homo sapiens) [TaxId: 9606]
d2a2ga_ : (ARG99) (GLY142) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1dyqa2 : (GLU122) (ASN168) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Staphylococcal enterotoxin A, SEA |Staphylococcus aureus [TaxId: 1280]
d2h28a1 : (PRO28) (GLY80) [view usage] : d.110.8.1 |Profilin-like |YeeU-like |YagB/YeeU/YfjZ-like |Hypothetical protein YeeU |Escherichia coli [TaxId: 562]
d1d4ba_ : (PHE38) (LEU68) [view usage] : d.15.2.1 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |CAD domain |Cell death-inducing effector B (CIDE-B), N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1bwda_ : (THR231) (MET285) [view usage] : d.126.1.2 |Pentein, beta/alpha-propeller |Pentein |Amidinotransferase |L-arginine: inosamine-phosphate amidinotransferase |Streptomyces griseus [TaxId: 1911]
d2kjra_ : (ASP14) (THR51) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1b0ca_ : (ILE19) (GLY56) [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Pancreatic trypsin inhibitor, BPTI |Cow (Bos taurus) [TaxId: 9913]
d1wgga_ : (SER5) (GLY42) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin carboxyl-terminal hydrolase 14 |Mouse (Mus musculus) [TaxId: 10090]
d2klia_ : (LEU152) (LEU202) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Sensor protein CYB2465 |Synechococcus sp. [TaxId: 321332]
d2ofrx_ : (SER115) (ALA156) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 4 |Rhodnius prolixus [TaxId: 13249]
d2pstx_ : (ILE10) (VAL54) [view usage] : d.100.2.1 |MbtH/L9 domain-like |MbtH-like |MbtH-like |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1bf0a_ : (LYS17) (LEU58) [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Calcicludine (cac) |Green mamba (Dendroaspis angusticeps) [TaxId: 8618]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.60, d.126, d.110, d.134, d.15, g.7, g.8, d.100