Tableau information
Concept source: d2qyib_ amino acid (a.a.) range (THR620)(VAL719)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR620) (PRO625) E1
(PRO660) (GLN666) E2
(LEU677) (PHE682) E3
(GLU714) (VAL719) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 108.5° E2
E3 -94.7° 153.6° E3
H4 45.5° -112.3° 92.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4jh1a_ : (VAL88) (LYS132) [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Bacillus cereus [TaxId: 222523]
d1btna_ : (ASN6) (SER46) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |beta-spectrin |Mouse (Mus musculus), brain [TaxId: 10090]
d1b3qa2 : (THR565) (GLN600) [view usage] : b.40.7.1 |OB-fold |CheW-like |CheW-like |Histidine kinase CheA, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d3i2aa_ : (TYR22) (VAL119) [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |automated matches |Winged bean (Psophocarpus tetragonolobus) [TaxId: 3891]
d1b9ma3 : (ARG128) (LEU170) [view usage] : b.40.6.2 |OB-fold |MOP-like |BiMOP, duplicated molybdate-binding domain |C-terminal domain of molybdate-dependent transcriptional regulator ModE |Escherichia coli [TaxId: 562]
d2wk4a_ : (ASN388) (TRP419) [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Sapporo virus [TaxId: 95342]
d1yz1b_ : (PHE0) (HIS76) [view usage] : b.88.1.2 |Mss4-like |Mss4-like |Translationally controlled tumor protein TCTP (histamine-releasing factor) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jzra_ : (LEU89) (ASP139) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain |Neisseria meningitidis serogroup A [TaxId: 65699]
d1h10a_ : (LEU12) (ALA50) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Rac-alpha serine/threonine kinase |Human (Homo sapiens) [TaxId: 9606]
d4dgja_ : (VAL15) (VAL43) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xzwb2 : (HIS888) (SER926) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Plant purple acid phosphatase, catalytic domain |Sweet potato (Ipomoea batatas) [TaxId: 4120]
d1b3ja1 : (VAL182) (GLN229) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class I MHC homolog, alpha-3 domain |Human (Homo sapiens), Mic-a [TaxId: 9606]
d3qyda_ : (THR20) (VAL119) [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |automated matches |Winged bean (Psophocarpus tetragonolobus) [TaxId: 3891]
d2qyib_ : (THR620) (VAL719) [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |chymotrypsin inhibitor WCI |Winged bean (Psophocarpus tetragonolobus) [TaxId: 3891]
d1r54a_ : (GLY303) (GLY352) [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |ADAM33 |Human (Homo sapiens) [TaxId: 9606]
d1k0sa_ : (MET32) (LEU69) [view usage] : b.40.7.1 |OB-fold |CheW-like |CheW-like |Chemotaxis protein CheW |Thermotoga maritima [TaxId: 2336]
d3lqca_ : (HIS56) (SER101) [view usage] : b.18.1.8 |Galactose-binding domain-like |Galactose-binding domain-like |N-terminal domain of xrcc1 |N-terminal domain of xrcc1 |Human (Homo sapiens) [TaxId: 9606]
d2b1xa1 : (HIS105) (GLY132) [view usage] : b.33.1.2 |ISP domain |ISP domain |Ring hydroxylating alpha subunit ISP domain |Naphthalene 1,2-dioxygenase alpha subunit, N-domain |Rhodococcus sp. ncimb12038 [TaxId: 92694]
d3i2xb_ : (THR20) (VAL119) [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |automated matches |Winged bean (Psophocarpus tetragonolobus) [TaxId: 3891]
d1npbb_ : (VAL89) (PRO130) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Fosfomycin resistance protein A (FosA) |Serratia marcescens [TaxId: 615]
d4dgjc_ : (VAL15) (TYR44) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2iaja1 : (LYS46) (ARG83) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1r55a_ : (GLY303) (GLY352) [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |ADAM33 |Human (Homo sapiens) [TaxId: 9606]
d3fnka_ : (THR13) (GLN54) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
d1yuaa1 : (PRO12) (ARG47) [view usage] : g.41.3.3 |Rubredoxin-like |Zinc beta-ribbon |Prokaryotic DNA topoisomerase I, a C-terminal fragment |Prokaryotic DNA topoisomerase I, a C-terminal fragment |Escherichia coli [TaxId: 562]
d1unqa_ : (LEU12) (ALA50) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Rac-alpha serine/threonine kinase |Human (Homo sapiens) [TaxId: 9606]
d1npba_ : (VAL89) (LYS129) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Fosfomycin resistance protein A (FosA) |Serratia marcescens [TaxId: 615]
d1ekbb_ : (TRP29) (TYR60) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Enteropeptidase (enterokinase light chain) |Cow (Bos taurus) [TaxId: 9913]
d2rqba_ : (ILE903) (LEU938) [view usage] : b.88.2.1 |Mss4-like |RIG-I C-terminal-like |RIG-I C-terminal domain-like |MDA5 C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2ddfb_ : (CYS365) (GLY412) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, d.159, b.47, d.92, b.40, c.47, b.18, b.2, d.32, b.1, b.42, b.55, b.88, b.33, g.41